Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewmr4_1275 |
Symbol | |
ID | 4251208 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. MR-4 |
Kingdom | Bacteria |
Replicon accession | NC_008321 |
Strand | + |
Start bp | 1482264 |
End bp | 1483631 |
Gene Length | 1368 bp |
Protein Length | 455 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 638117860 |
Product | flagellar hook-associated 2 domain-containing protein |
Protein accession | YP_733411 |
Protein GI | 113969618 |
COG category | [N] Cell motility |
COG ID | [COG1345] Flagellar capping protein |
TIGRFAM ID | [TIGR01145] ATP synthase, F1 delta subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 35 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 0.427592 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGGCTTAA CATCGGTTGG TATTGGTTCT GGCATGGATA TCGGTGGCAT AGTCACAGCG TTAGTGAATG CTGAAAGTGC CGGTAAAATT GCTAAGTTTG ATGTCAATGA AGGTAAGCTT AATGCGCAAA TTTCGGGTAT TGGCGCATTA AAAAGTGCCA TGTCTGAATT TAACGATAAA TTAAAAACGC TCGCTAAGGC CGAAACCTTT GGTAGTCAAA AGGTTGTGAC TTCCTCAAAA GATTATCTCT CTGCCACTGT AGATAAAACC GCGGTTTCTG GCACTTATCA AATTAAAGTC GAGCAATTGG CTCAAAGCCA GAAAGTCGGC ACAGCTGTAG CTACAGATAC AACCTCACCG ATAGGTGAAG GAGCTTTATC CATTAAGGTG GGAAGTGGAA CAGCTTTTAA TATTGATGTC TCCGCTACTG ACTCCCTAAC CGATATTATG AATAAGATTA ATAAATCTGA TGATAATACC GATGTTACTG CCACCATAGT AAATGGGGAG CTGGGGCCTC AGCTGGTGTT AGGTTCCAAG AAGACTGGTG AGGATAACCA GATTTCAGTA ACTGCAACGG ATAGCGGAGC GGGTACTGGT TTGTCAGATA CCTTTACGAT GAGTGAAGTC ACGCCCGCCA AAAACGCAAT AGTGTATGTC GATGGCGTAA AGGTGGTTTC AGACTCCAAT ACACTTGATA AGGCCATTAC TGGCGTTTCA TTAACCTTAA CCGCCGCCGA TGTAGATAAA ACGACAACAA TGACCGTGAG TAAAGATACG GCGAAAACGA AAACTGCGAT AGAGGGGTTT GTTGAGTCCT ATAACAGTTT GATGACCACA ATTCAGAACC TCACTAAATA TGATGCCGAT ACAAAGCAGG CTGGGATATT ACAAGGTGAT GCCTTACCCC GTAGCATTCA GAGCCAATTA CGTACTATGG TTTCAAGCGA GTTTGATACT TCAGACGGAA AACAGGTGCT CGCAAATTTA GGGATAAAAA CGACTCGTGA AGGATTGTTG GAAATTGATT CGACTAAATT AACTGAGTCA TTGAAAAATG ACAAGGGGAC AATTAGCGAG TTATTTACCT CTGAGAATAC GGGACTTTCG GCGAAAATGT CTGGTTTGGT AGATACTTAT ATAAAATCTG GCGGTATTAT CGATGGGCGG GATAATTCCC TTGATGAACA ACTCGCCCGT ATTGCCGATA GTCGAGAGCA GCTAAGCACT CGGATGGCCG CTTACAGCGA TCGCTTATAT AAGCAATTTA ATGCTATGGA TTTGGTTGTG GCAAATCTGA ACTCTCAATC CAGCATGTTG TTATCACGTT TAGATTCATT GCCTGGTGTT GTTCGACAGA ATAAATAG
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Protein sequence | MGLTSVGIGS GMDIGGIVTA LVNAESAGKI AKFDVNEGKL NAQISGIGAL KSAMSEFNDK LKTLAKAETF GSQKVVTSSK DYLSATVDKT AVSGTYQIKV EQLAQSQKVG TAVATDTTSP IGEGALSIKV GSGTAFNIDV SATDSLTDIM NKINKSDDNT DVTATIVNGE LGPQLVLGSK KTGEDNQISV TATDSGAGTG LSDTFTMSEV TPAKNAIVYV DGVKVVSDSN TLDKAITGVS LTLTAADVDK TTTMTVSKDT AKTKTAIEGF VESYNSLMTT IQNLTKYDAD TKQAGILQGD ALPRSIQSQL RTMVSSEFDT SDGKQVLANL GIKTTREGLL EIDSTKLTES LKNDKGTISE LFTSENTGLS AKMSGLVDTY IKSGGIIDGR DNSLDEQLAR IADSREQLST RMAAYSDRLY KQFNAMDLVV ANLNSQSSML LSRLDSLPGV VRQNK
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