Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewmr4_1240 |
Symbol | |
ID | 4251296 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. MR-4 |
Kingdom | Bacteria |
Replicon accession | NC_008321 |
Strand | + |
Start bp | 1448299 |
End bp | 1449438 |
Gene Length | 1140 bp |
Protein Length | 379 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 638117825 |
Product | cytochrome d ubiquinol oxidase, subunit II |
Protein accession | YP_733377 |
Protein GI | 113969584 |
COG category | [C] Energy production and conversion |
COG ID | [COG1294] Cytochrome bd-type quinol oxidase, subunit 2 |
TIGRFAM ID | [TIGR00203] cytochrome d oxidase, subunit II (cydB) |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.256335 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 36 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTTTGATT ATGAAATATT GAGAGTTATC TGGTGGGCTC TGATCGGCGT ACTGTTCATC GGATTTGCGG TCACTGACGG TTTTGACATG GGCGTGGGTG CACTTTTACC GATTATCGGT AAAGACGATA CTGAGCGCCG TATTATGGTC AACACCATTG CTCCCCATTG GGACGGTAAC CAAGTATGGT TAATCACCGC AGGTGGTGCC TTGTTTGCGG CATGGCCTAT GGTGTATGCA GTGTCTTTCT CTGGCTTCTA TGTGGCCATG ATGTTAGTGC TGTTTGCCTT GTACACTCGT CCTGTCGGAT TTGACTATCG CTCTAAGATT GAAAATCCAA AATGGCGTAA GTCGTGGGAC TGGGCATTGT TCTGTGGTGG CTTTATTCCA CCGCTGATCA TCGGTGTGGC CTTCGGTAAC TTACTCCAAG GTGTACCATT CAATTTCGAT GAGTTCCTGC GTGCGACTTA TCACGGTGGT TTATTTGGCC TGTTGAACCC ATTCGGTTTA CTGGCGGGCT TAGTGAGCGT GAGCATGTTT ATGATGCAAG GCGCTGCTTG GTTACAAATG AAGACCGACG GTGAGCTGCG TGTACGTGCC GCGAATGCGA CTCAGCTATG TGCACTGTTA GTGGCAGTAT TATTTGCCGC TGCGGGTGTG TGGTTAGCCA ATGGTATTGA TGGTTATGTT ATCACTTCAA CCCTTGACCA CCATGCACTG TCTAACCCAA CGCTGAAAAC CGTTGCGGTT GAATCTGGCG CTTGGTTAGC CAACTACGAT AAGTATCCTA TTACTATGCT GTTCCCAGTA TTAGGTGTGG CATTACCACT GCTGGTTATC CTAGTGAGCC GCTTAAATCG TTCAGGTTTT GCGTTCTTAT TTAGCTCGCT GACAGTGGCT ATGGTGATCT TAACTTGTGG TGCAGCAATG TTCCCATTCG TTATGCCATC TTCATTAGAT CCTAACGTGA GCTTAACCAT GTGGGATGCG ACTGCGAGTG AAATGACATT AACTGTGATG ACTTGGGCGG CGATTATCTT CGTTCCAATC GTGTTAAGTT ACACTGTATG GACTTACTTC AAGATGTTTG GCCGCTTAAA CCGCAAACAT ATTGAAGATA ACAAAGCCTC ACTCTATTAG
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Protein sequence | MFDYEILRVI WWALIGVLFI GFAVTDGFDM GVGALLPIIG KDDTERRIMV NTIAPHWDGN QVWLITAGGA LFAAWPMVYA VSFSGFYVAM MLVLFALYTR PVGFDYRSKI ENPKWRKSWD WALFCGGFIP PLIIGVAFGN LLQGVPFNFD EFLRATYHGG LFGLLNPFGL LAGLVSVSMF MMQGAAWLQM KTDGELRVRA ANATQLCALL VAVLFAAAGV WLANGIDGYV ITSTLDHHAL SNPTLKTVAV ESGAWLANYD KYPITMLFPV LGVALPLLVI LVSRLNRSGF AFLFSSLTVA MVILTCGAAM FPFVMPSSLD PNVSLTMWDA TASEMTLTVM TWAAIIFVPI VLSYTVWTYF KMFGRLNRKH IEDNKASLY
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