Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewmr4_1236 |
Symbol | |
ID | 4251292 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. MR-4 |
Kingdom | Bacteria |
Replicon accession | NC_008321 |
Strand | + |
Start bp | 1438690 |
End bp | 1439448 |
Gene Length | 759 bp |
Protein Length | 252 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 638117821 |
Product | CMP/dCMP deaminase, zinc-binding |
Protein accession | YP_733373 |
Protein GI | 113969580 |
COG category | [F] Nucleotide transport and metabolism [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0590] Cytosine/adenosine deaminases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.469544 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 34 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGGAGCAGA CAAAACTGAA CCCAAAAACC TTGCATGCGA AGACGCTCAG CTCTGATGAA CTTGGCGCTG ATGAACTTGG CGCTGATGAA CTTGGCTCTG TTGAACTTGG CTCTGTTGAA CTTGGCTCTG TTGAACTTGG CTCTGTTGAA CTTGGCGCTG ATGAACTTGG TTGTGATGAA GCTAGTGGTA ATGTGTTAAT TGGCGAGCAA CCTTGTCTCA ATCAAGCGAG TCTCAATCAA GTGGATGTTG AACAACCTCG AGTCGATGAA CATTGGATGC GTGTCGCAAT GGCCATGGCT GAAAAGGCTG AGGCTGCGGG TGAAGTACCT GTGGGGGCGG TTTTAGTCAA AGAGGGTCAG CAAATCGCCA CTGGATACAA CTTGTCTATC AGTGAGCACG ACCCGTGCGC CCATGCTGAA ATTCAGTGTT TGCGAGCAGC GGGACAGACG ATTGAAAACT ATCGACTCCT CGATACCACT CTTTACGTTA CCCTCGAGCC TTGTGCAATG TGCGCCGGTG CTATGGTGCA TAGCCGGATT GCCCGCGTGG TATTTGGGGC AAAGGATGAG AAGACGGGCG CTGCAGGAAC CGTGCTTAAC CTCTTGCAGC ATCCAGCCTT TAATCATCAA GTTGAGATTA CATCTGGGGT GTTAGCGCAG GACTGTGCTG ACCAATTGAG CCGCTTTTTT AAACGTCGCA GGGAGGAAAA GAAGGCTTTA AAACAGGCTC AAAAGGCGCA GCAGGGGACG CTATCCTAA
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Protein sequence | MEQTKLNPKT LHAKTLSSDE LGADELGADE LGSVELGSVE LGSVELGSVE LGADELGCDE ASGNVLIGEQ PCLNQASLNQ VDVEQPRVDE HWMRVAMAMA EKAEAAGEVP VGAVLVKEGQ QIATGYNLSI SEHDPCAHAE IQCLRAAGQT IENYRLLDTT LYVTLEPCAM CAGAMVHSRI ARVVFGAKDE KTGAAGTVLN LLQHPAFNHQ VEITSGVLAQ DCADQLSRFF KRRREEKKAL KQAQKAQQGT LS
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