Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewmr4_1230 |
Symbol | |
ID | 4251286 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. MR-4 |
Kingdom | Bacteria |
Replicon accession | NC_008321 |
Strand | + |
Start bp | 1430440 |
End bp | 1431060 |
Gene Length | 621 bp |
Protein Length | 206 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 638117815 |
Product | hypothetical protein |
Protein accession | YP_733367 |
Protein GI | 113969574 |
COG category | [S] Function unknown |
COG ID | [COG2976] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.833098 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 32 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGGAAATTT ATAGCACAGA AGAACAACAA GTTGATGCTA TCAAGCAGTT CTGGAAAGAC TATGGAACCT CGATTGTTAT CGGGGCGGTC GTTGGTTTAG GCGGCCTGTA CGGTTGGAAC TATTACTCCG ACATGAAAAT CGTGAAGGCC GAAGAAGCAT CACAGGCTTT CCAAACTTTA ACCACCAAAT CAAGTGACGA AGCGGCCATG CTGGCTGGCG TTGCTGAGTT TTCCAAAAAT CACGACCAAA AGGGCTATCA AGCCCTGCTG GATCTGATCG TTGCGAAAAC CGCGGTTGAA GCGAAAGATT TCCCTAAGGC CGAAGAAGCG CTGAAGAAGG TGATTGCCGC TAAGCCAGGT GCTGGATTAG ACACAGTGGC AACACTGCGT TTAGCGCGCA TTCAGGCAGA GCAAGGTCAA ATCGGTACTG CGCTGGCGAC TTTAGATCAA GTGACTGATA AAGCATTCTT AGCACAACGT GAAGAACTCA AAGGCGATTT CTTTGTACGC CAAGGCGAAG CGGATAAAGC GAAAACCGCT TACCAAGCGG CAATGGACAA TGGCGGTGTT GTGACCAGCC CTGCACTTAA AATCAAACTT GATAACCTAA ATCAAGCATA A
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Protein sequence | MEIYSTEEQQ VDAIKQFWKD YGTSIVIGAV VGLGGLYGWN YYSDMKIVKA EEASQAFQTL TTKSSDEAAM LAGVAEFSKN HDQKGYQALL DLIVAKTAVE AKDFPKAEEA LKKVIAAKPG AGLDTVATLR LARIQAEQGQ IGTALATLDQ VTDKAFLAQR EELKGDFFVR QGEADKAKTA YQAAMDNGGV VTSPALKIKL DNLNQA
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