Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewmr4_1182 |
Symbol | |
ID | 4251466 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. MR-4 |
Kingdom | Bacteria |
Replicon accession | NC_008321 |
Strand | + |
Start bp | 1385396 |
End bp | 1385722 |
Gene Length | 327 bp |
Protein Length | 108 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 638117767 |
Product | hypothetical protein |
Protein accession | YP_733319 |
Protein GI | 113969526 |
COG category | [S] Function unknown |
COG ID | [COG3171] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 1 |
Plasmid unclonability p-value | 0.0000000292062 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 31 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCAAAGA ATCGTAGCCG TCGTTTACGT AAGAAAATGC GCGTTGATGA ATTCCAAGAG TTAGGTTTTG ACATTACTTG GACCTTCGAT GCATCTGTCT CTGAAGCCGA TATTGATGCA ACAGTCGATA AGTTTATCGA TGAAGTCATT GAAGCCCGTA AGTTAGGTTT CCACGGCGGT GGTCATATCG AGTGGGAAGG TATTATTGCG ACCCAAACTA TCGGTAAGTG CACCGAAGAA GATGTTGCTG CAGTGAAGGC TTTCTGGGCG GGTCAAAAAG TGACTCAACT TGAAGTTAGC GATCTGTACG ATATCTGGTG GAGTTAA
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Protein sequence | MAKNRSRRLR KKMRVDEFQE LGFDITWTFD ASVSEADIDA TVDKFIDEVI EARKLGFHGG GHIEWEGIIA TQTIGKCTEE DVAAVKAFWA GQKVTQLEVS DLYDIWWS
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