Gene Shewmr4_1182 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr4_1182 
Symbol 
ID4251466 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-4 
KingdomBacteria 
Replicon accessionNC_008321 
Strand
Start bp1385396 
End bp1385722 
Gene Length327 bp 
Protein Length108 aa 
Translation table11 
GC content45% 
IMG OID638117767 
Producthypothetical protein 
Protein accessionYP_733319 
Protein GI113969526 
COG category[S] Function unknown 
COG ID[COG3171] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0000000292062 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCAAAGA ATCGTAGCCG TCGTTTACGT AAGAAAATGC GCGTTGATGA ATTCCAAGAG 
TTAGGTTTTG ACATTACTTG GACCTTCGAT GCATCTGTCT CTGAAGCCGA TATTGATGCA
ACAGTCGATA AGTTTATCGA TGAAGTCATT GAAGCCCGTA AGTTAGGTTT CCACGGCGGT
GGTCATATCG AGTGGGAAGG TATTATTGCG ACCCAAACTA TCGGTAAGTG CACCGAAGAA
GATGTTGCTG CAGTGAAGGC TTTCTGGGCG GGTCAAAAAG TGACTCAACT TGAAGTTAGC
GATCTGTACG ATATCTGGTG GAGTTAA
 
Protein sequence
MAKNRSRRLR KKMRVDEFQE LGFDITWTFD ASVSEADIDA TVDKFIDEVI EARKLGFHGG 
GHIEWEGIIA TQTIGKCTEE DVAAVKAFWA GQKVTQLEVS DLYDIWWS