Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewmr4_1149 |
Symbol | |
ID | 4251817 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. MR-4 |
Kingdom | Bacteria |
Replicon accession | NC_008321 |
Strand | + |
Start bp | 1351448 |
End bp | 1353016 |
Gene Length | 1569 bp |
Protein Length | 522 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 638117730 |
Product | methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor |
Protein accession | YP_733286 |
Protein GI | 113969493 |
COG category | [N] Cell motility [T] Signal transduction mechanisms |
COG ID | [COG0840] Methyl-accepting chemotaxis protein |
TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.737349 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 40 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCAAACAC ATTCAAAAAA TGGTGAAAAA CACCTATCCG AAAACGCTAT TCTCCTCTCG ACAACCGATC TGAAAGGCAA CATTAAGTAT GTCAATCAAA CCTTTTCGCA GATCAGTGAA TATAGCGTTG CCGAGTTGCA GGGGAGCCCG CATAACATAG TGCGCCATGG TGATATGCCA TCAGCCGCCT TTAAAATGCT TTGGGAACGG ATAAGAAGCG GCAAACCTTG GATGGGGATT GTCAAAAATA GAACAAAAAC CGGTGGCTAT TACTGGGTGA ATGCCTACGT CGCCCCTGTG TACGAAAATG GCAAAATTCA TGAGTATCAA TCCGTTCGCC GCCAAGCAAC CCCAGAACAA ATCAAGGCGG CCGAGGAAAT CTATCAAGGG ATCAATCAAG GACAACAGCC CAAGGCGCTG AAAAAAGACC GCTTAGGATT TCGCGGAAAA ATACTCGTGA CGATGTTGTT TACCATCGCA CTAACTGCCT ACTTGGCAAC GTATTCGCCC ATCTTAGCTG CCCTTGCTGG TGGACTACTT GCTTTGGGTC TGTGGTATAT GCTCATGCAG CCTTTTCAGG CATTAGTACA GGTGGCCAGC AATATTATCG ATGATCCCGT TGCTATGGGG GTTTACACCG GCAGGCAAGA TGAAATCGGT AAGCTAGATC TGGCGCTGCG ATTTTTGATC ACCGAAATTG GCGGCGTAGT GGGCCGAATG GCGGATTCTG CCAGTGAGAT CCAAGAGCAG AGCGTGAATC TGAAACAAAC TATCACCAAT ACTTGGGAAC ATGCCGATAG CCAGAGCGCG CAAACCACAC AGGCTGCAAC GGCGATGGAG CAAATGAGTG CCAGCTTTGC GGAGGTAACG GATAATATCC ATCGCACCGC ATCCGAGATG GTTTCTAGCC ATGAGGCGGC GCAGCGTGGT CATTCACGGC TTGAAACCGT TATCGAGGCG ATACATCAGC TGAGTGTACA GGTGAGCCAT TTCTCCGATG TGGTGCAAAC GATTGAGCAG GACAGCCAAG CGATTCATCA AGTGCTAGAA GTGATCCGCG CGATTGCCGA TCAAACCAAT CTGTTAGCGC TGAATGCCGC GATTGAAGCG GCGCGGGCGG GGGAAAGCGG TCGCGGTTTT GCGGTCGTTG CCGATGAAGT CCGGCAGTTA TCTAGCCGAA CCAGCCAGTC GACCTCGCAA ATTGAACAGA TTGTAAGCCG CTTTAAAGAC AGTACGCAAA GGGCGGTATC AACTATGACG GCGGGTCAAG AGCAGGTTAA GCGCTCAGTT TCATTAGCGC AGGATGCCAG CATTGCCTTT GGTGAGTTGT TATCTTCTAT CGCTAGAATT AACTCTTTGA GTGATGATAA TGCGGCCGCA ATGACTCAGC AGACCTCCGT GGCGGCAGAA ATCAGCCGTG CTATCCATGT GATCAGCGAT TTGGCGCAGC AGAGTTTGCA GCAGACCCAG GATGCGGCGG CCAGGGGAGA TCAGGTTTCG CGATTATCGA CTAAAACCCA CCACCTATCG CAGCAATTCT GGCAACAGAG CGTACAACGT AAGTATTAA
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Protein sequence | MQTHSKNGEK HLSENAILLS TTDLKGNIKY VNQTFSQISE YSVAELQGSP HNIVRHGDMP SAAFKMLWER IRSGKPWMGI VKNRTKTGGY YWVNAYVAPV YENGKIHEYQ SVRRQATPEQ IKAAEEIYQG INQGQQPKAL KKDRLGFRGK ILVTMLFTIA LTAYLATYSP ILAALAGGLL ALGLWYMLMQ PFQALVQVAS NIIDDPVAMG VYTGRQDEIG KLDLALRFLI TEIGGVVGRM ADSASEIQEQ SVNLKQTITN TWEHADSQSA QTTQAATAME QMSASFAEVT DNIHRTASEM VSSHEAAQRG HSRLETVIEA IHQLSVQVSH FSDVVQTIEQ DSQAIHQVLE VIRAIADQTN LLALNAAIEA ARAGESGRGF AVVADEVRQL SSRTSQSTSQ IEQIVSRFKD STQRAVSTMT AGQEQVKRSV SLAQDASIAF GELLSSIARI NSLSDDNAAA MTQQTSVAAE ISRAIHVISD LAQQSLQQTQ DAAARGDQVS RLSTKTHHLS QQFWQQSVQR KY
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