Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewmr4_1109 |
Symbol | |
ID | 4251077 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. MR-4 |
Kingdom | Bacteria |
Replicon accession | NC_008321 |
Strand | - |
Start bp | 1299419 |
End bp | 1302226 |
Gene Length | 2808 bp |
Protein Length | 935 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 638117682 |
Product | hybrid sensory histidine kinase BarA |
Protein accession | YP_733246 |
Protein GI | 113969453 |
COG category | [K] Transcription [T] Signal transduction mechanisms |
COG ID | [COG0642] Signal transduction histidine kinase [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 0.715392 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAACCCTG TCAACAACAT GACCAAATAC AGCTTACGTT CCTGGGTTCT GGTGCTAGCG CTTGCGCCGA CGATCTTAGT CGGTATTCTG CTGGGCAGCT ACTTTACCAT AAATCGCTTC TATGAACTCG AAGATACGCT GATTGAACAG GGCAGCAATA TTATCGAACC TTTAGCAATT GCCAGTGAAG TGGGACTCGT GGGCAATGAC AGGGAAGCGA CCAAACGACT CCTTGCCGCC GCGCAACTCA ATAAGTCCAC ACTCGTCAAA TCCATCGCCA TTTTTGACAT TCAAAATCAA CTCTTTGTCA CATCGCATTA CCACAAAGAC TTCGAAATCA TGCGCTATAA AGAGGCGCTG AGTAATCTGC ACAAAACCGA AATCGAGCAT GTAGGCGATA GCCTTATCCT TCGAACGCCG ATTTTTGCTA CCGCCCCTCC GGCGCCGGGC GCGACCATCA ATTTTGATAT TCAAACCGAT AACGGCGAGT TGCTCGGCTA TATTTCGGTG ATTATCAATA AAGAACGCGC GCTGCTCGAA CAGCACAGGG CCGCCGTGGC CGCCTTTATT ATCGTCTTGA TTGGGGTGCA ATTAAACCTG TTGTTTACCT TTCGTCTGGT TAAAAACGTT ACCCAGCCGA TTACCGAAAT GGTGCGAGTG GTGGCCAAAA TTCGCGAGGG TAAACTCGAT GCGAGGCTCG AAGGTAATCT TATCGGTGAG CTGGATTTGC TTAAACGCGG TATTAACGCC ATGGCGGGTT CGCTATCGGA ATATCACGAT GAGATGCAGC AAAATATCGA TCAGGCCACC TCGGATCTGC GGGAAACCTT AGAGCAGATT GAGATCCAAA ACGTCGAGCT CGACTTAGCC AAAAAACGCG CGCTGGAGGC CAGCCGCATT AAGTCGGAGT TCTTGGCGAA CATGTCCCAC GAACTGCGCA CGCCATTAAA CGGCGTGATA GGCTTTGCCC GTCAGCTCGT TAAAACCCCG TTGCACTCGA GCCAAGTCGA TTACATTAAT ACCATCGAGC GCAGCGCGAC TAACCTACTG GCGATTATCA ACGATATTCT CGACTTCTCG AAACTCGAAG CCGGTAAAAT GGTGTTAGAA AAAATGCCAT TCGGCTTAAG GGAAACCTTA GGTGAGACGA TTACCTTAAT CTCCGGCAGC GCGCAGGCGA AAGGGCTTGA GTTAGTTGTC GATATTGCAC CCAACGTCCC CGACAATGTT AATGGCGATG CGATGCGTGT TTGTCAGATT ATCAATAACT TAGTAGGCAA TGCCATCAAG TTTACCGATT CGGGCAGCGT GTTAGTCAAA TTAGAGCTAC AAAATCAAAC CGACGAACAA GTGGTACTGC GCTGTGATGT AATTGATACC GGGATTGGGA TTGACGACAG CCAGCAGGAC TTCCTCTTCC AAGCCTTTGG TCAAGCGGAC TCCTCGATTT CTCGCCGCTT TGGCGGCACA GGGCTGGGGC TCGTTATCAC TAAGCGCCTA GTCAATCAAA TGGGCGGCCA AATTGGCTTT ACCTCGGCGG TGGATAAGGG TTCAAACTTC TGGTTCACCC TGCCATTGGG CCTAGGTCAA TTCCAGATCG GCGATTCGCT ACCCCTTGAA AAACTCAAAG ATAAAACCGT GCTGTTTTAT GAGCCCAGAG TGCTCACCCA TTCGGTGATT AGTCGCCAAC TAAAACAGTG GGATACCAAA GTTACCCACC ATCAACACAT TCCGAGCTTA CTCACGACGC TCTCAACCAC TGAGCATCAG TTCGATTATG TGTTATTGAG CTGCCATGGA TTTAGCAATC CCAATCAATT AGTCAGCACC TTAAACCAAG CCAAGACCAA GACGGATTGC TTAATTGTAC TGTTCGATTG CCAAGAGCAG GAAGTGCTAA GCCAGTTTAT TCGCCCCAAT GCCGATGTAG TGTTGTCACT GCCAGTAAGC GAGCACCAAC TGGCGCGCAA TATGCTCTAT CCACCGATGG AATATGATAT TTCACCACCT GCCAGCATCA CAGTGCCCGC CGCGCGCCAA TCACTGACCG TATTGGCGGT GGACGATAAC TTTGCCAATT TAAAACTGAT TGATACGCTG CTTAGTGAGT TAGTGACGAC AGTTATCGCC GTTAACAGCG GTGAAGAAGC CGTGAAACAA GCCAAGGGCC GCACCTTTGA CCTTATCTTT ATGGATATTC AGATGCCAGG CACCGACGGG ATCAGCGCCA CTAAGCAAAT CCGTCAAGGG TCGATGAACC GCAACACGCC AATTATAGCC GTGACGGCCC ATGCGATAGC CGAGGAGCGT GAGCTGATTT TAGGCTGTGG TATGGATGGC TATTTGCCCA AGCCCATAGA TGAAGCCGCC CTCAAAGCGG AGATAAACCG CTGGATCACC CGGCCCAAGT TTACCCACTT CGATTTACAT ACCCTCAACT GGGATTTGTG TCTCACCCAA GCCAACCATA AGTCGGATTT GGCGTTAGAT ATGTTGCGTA TGCTGTTGGA CTCGCTGCCC CAAACCGTCT TGGCAATCGA GACGGCGCTG GGTCAGGACG ATCAGGACAC TATGCTCACA ACTATCCACA AACTTCATGG TGCCAGTTGC TATTGCGGAG TGCCAACGAC ACAGCGATTA TGCCAAGAGA TTGAATCGGC ATTGAAACGT GATGCCCGTG TCGAAGATCT CGAACCGGAA ATACTAGAGT TACTTGATGA GCTAACTAAG GTAGAATCGG CGGCAAAACA AGTGCTATCA CAGCTATCAG CGGAAATTAC AGATGACCAA AAAAACGGGC TTCTTTAA
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Protein sequence | MNPVNNMTKY SLRSWVLVLA LAPTILVGIL LGSYFTINRF YELEDTLIEQ GSNIIEPLAI ASEVGLVGND REATKRLLAA AQLNKSTLVK SIAIFDIQNQ LFVTSHYHKD FEIMRYKEAL SNLHKTEIEH VGDSLILRTP IFATAPPAPG ATINFDIQTD NGELLGYISV IINKERALLE QHRAAVAAFI IVLIGVQLNL LFTFRLVKNV TQPITEMVRV VAKIREGKLD ARLEGNLIGE LDLLKRGINA MAGSLSEYHD EMQQNIDQAT SDLRETLEQI EIQNVELDLA KKRALEASRI KSEFLANMSH ELRTPLNGVI GFARQLVKTP LHSSQVDYIN TIERSATNLL AIINDILDFS KLEAGKMVLE KMPFGLRETL GETITLISGS AQAKGLELVV DIAPNVPDNV NGDAMRVCQI INNLVGNAIK FTDSGSVLVK LELQNQTDEQ VVLRCDVIDT GIGIDDSQQD FLFQAFGQAD SSISRRFGGT GLGLVITKRL VNQMGGQIGF TSAVDKGSNF WFTLPLGLGQ FQIGDSLPLE KLKDKTVLFY EPRVLTHSVI SRQLKQWDTK VTHHQHIPSL LTTLSTTEHQ FDYVLLSCHG FSNPNQLVST LNQAKTKTDC LIVLFDCQEQ EVLSQFIRPN ADVVLSLPVS EHQLARNMLY PPMEYDISPP ASITVPAARQ SLTVLAVDDN FANLKLIDTL LSELVTTVIA VNSGEEAVKQ AKGRTFDLIF MDIQMPGTDG ISATKQIRQG SMNRNTPIIA VTAHAIAEER ELILGCGMDG YLPKPIDEAA LKAEINRWIT RPKFTHFDLH TLNWDLCLTQ ANHKSDLALD MLRMLLDSLP QTVLAIETAL GQDDQDTMLT TIHKLHGASC YCGVPTTQRL CQEIESALKR DARVEDLEPE ILELLDELTK VESAAKQVLS QLSAEITDDQ KNGLL
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