| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr4_1104 |
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| Symbol | |
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| ID | 4251072 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008321 |
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| Strand | - |
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| Start bp | 1294585 |
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| End bp | 1296243 |
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| Gene Length | 1659 bp |
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| Protein Length | 552 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 638117677 |
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| Product | recombination and repair protein |
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| Protein accession | YP_733241 |
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| Protein GI | 113969448 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0497] ATPase involved in DNA repair |
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| TIGRFAM ID | [TIGR00634] DNA repair protein RecN |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 0.562592 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTTTGCC AACTCAGCAT CAACAATTTC GCTATCGTAC GTTTCCTTGA ACTGGACTTT
CGCCCCGGAA TGACCAGCAT TACCGGTGAG ACTGGCGCGG GAAAATCCAT CGCCATTGAC
GCACTAGGCT TATGCCTAGG TAACCGTGCC GATGCCAGCA GTGTTCGCCC TGGCGCGAGC
AAAACCGAAG TCAGTGCCCG ATTTTCCTTA GAGGATGTAC CTCTTGCAAA ACGTTGGCTC
GAAGATAACG ATCTCGAACT CGATGATGAG TGTATTCTAC GGCGAACCAT TGGTAGTGAC
GGCCGCTCAC GCGCCTATAT CAATGGCAAT CCCGTCCCTT TGACTCAGTT AAAATTACTG
GGGCAATTGC TTGTGGGGAT CCATGGCCAA CACGCCCACC ATGCAATGTT AAAGAGTGAG
CATCAGCTCA CCTTACTCGA TAGCTACGCC AATCACAGGC TGTTGATAGA TACAGTGGCG
GCAAGCTATC AGCGCTGTAA ACAAATTGAA GCCGAACTCA AACAATTAGA AGCCTCCCAG
CAGGAACGTA TCGCCCGTAA ACAGCTGGTG CAATATCAAG TTGAAGAGTT AGATGAGTTT
GATCTCAAGG TTGGTGAATT TGAAGAGATT GAACAGGAAC ATAAGCGCCT CGCAAATGGC
ACAGAGCTGG TTGATAGCTG CCAAGCCAGC CTGTTTTTAC TCACTGATGG CGAAGAGAGC
AATATCGAAT CACTGCTGAA CAAAGTCGTC GGCCTTGCCG AGAATCTGCA AAGCTATGAC
CCCGCTTTAA CCAATGTCAG CACTATGCTG AACGAAGCGC TTATTCAAGT ACAAGAAAGT
GCTGGCGAAT TGCAGCACTA CCTGAGTAAA CTCGAACTCG ATCCGGCGCA TTTTGCCTAT
TTAGAGGAAA GGCTCTCTAA AGCCATGCAA CTGGCCCGTA AGCACCATGT CAGCCCTGAT
AAATTAGCCG AGCATCATCT CGCCCTCAGA GCCGAACTCA CGACCCTAGA TCATGATGAA
AATAAGCTAG AAGATATTCA ACGCCAAGTG GAAGCCAGTA AAGTGGCCTA CCTCGCTAAC
GCGCAAAAGC TAAGTCAAAG CCGCGCCCGT TATGCGAAAG AGCTGGACAA GCTGGTGACT
CAATCCATCC ATGAGCTCAA CATGCCTAAG GGAAAGTTCA CCATTGAAGT GAATTTCAAT
CCAGAAATCA TGTCGATGAA CGGCAGCGAT AACATAGAGT TTATGGTTAC CACCAACCCA
GGCCAGCCAT TACAACCTAT ATCAAGGGTT GCCTCAGGCG GCGAATTGTC ACGTATTGGC
TTAGGTATCC AAGTCATTAC CGCGAAGAAG GTTGCTACCC CTACCCTGAT TTTCGACGAG
GTGGATGTTG GGATCTCAGG CCCCACAGCA GCCGTCGTTG GACGCATGCT GCGTAGCCTT
GGCGAGTCGA CCCAAGTTCT GTGTGTGACC CACTTACCTC AAGTTGCTGG TAACGGCCAT
CAACATATGT TTGTGAATAA ATTCAACAAG GCCGGAAGCA CTGAAACCAC TATGATGCCT
TTAGATAGGG AGCAACGTAT CCAAGAGCTC GCCAGATTAC TCGGTGGCGA TACGATTACG
ACGAATACCT TAGCCAATGC CAGGGAGTTA TTACAGTAG
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| Protein sequence | MLCQLSINNF AIVRFLELDF RPGMTSITGE TGAGKSIAID ALGLCLGNRA DASSVRPGAS
KTEVSARFSL EDVPLAKRWL EDNDLELDDE CILRRTIGSD GRSRAYINGN PVPLTQLKLL
GQLLVGIHGQ HAHHAMLKSE HQLTLLDSYA NHRLLIDTVA ASYQRCKQIE AELKQLEASQ
QERIARKQLV QYQVEELDEF DLKVGEFEEI EQEHKRLANG TELVDSCQAS LFLLTDGEES
NIESLLNKVV GLAENLQSYD PALTNVSTML NEALIQVQES AGELQHYLSK LELDPAHFAY
LEERLSKAMQ LARKHHVSPD KLAEHHLALR AELTTLDHDE NKLEDIQRQV EASKVAYLAN
AQKLSQSRAR YAKELDKLVT QSIHELNMPK GKFTIEVNFN PEIMSMNGSD NIEFMVTTNP
GQPLQPISRV ASGGELSRIG LGIQVITAKK VATPTLIFDE VDVGISGPTA AVVGRMLRSL
GESTQVLCVT HLPQVAGNGH QHMFVNKFNK AGSTETTMMP LDREQRIQEL ARLLGGDTIT
TNTLANAREL LQ
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