| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr4_1101 |
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| Symbol | |
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| ID | 4251069 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008321 |
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| Strand | + |
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| Start bp | 1291771 |
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| End bp | 1292727 |
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| Gene Length | 957 bp |
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| Protein Length | 318 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 638117674 |
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| Product | thiamine-monophosphate kinase |
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| Protein accession | YP_733238 |
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| Protein GI | 113969445 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0611] Thiamine monophosphate kinase |
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| TIGRFAM ID | [TIGR01379] thiamine-monophosphate kinase |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.00285593 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 0.797182 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAAAGAAT TCCAACTTAT TGAATGTTAT TTCAATCACC GCGGCCCCAC GCGCCGTGAT
GTCAAACTGA GTATTGGCGA CGATTGCGCC CTAGTGCAGC CCGCCGAAAA CAAGTCGATC
GCCATCTCCT GCGATACCTT AGTCGAAAAC GTTCACTTCT TCCCCGATAT TCCCCCTCAA
GCCTTAGGTT ACAAAGCCTT AGCAGTGAAT CTTTCAGATT TAGCCGCCAT GGGGGCAGAG
CCTGCGTGGA TGACGCTTGC GCTTACCTTA CCAGAGGTTA ACGAAGCCTG GCTGAGTGGG
TTTAGTGAGG GACTCTTCGA AGCGGCTGAA TACTATGGTA TTGCCCTCAT TGGCGGCGAT
ACCACCCGCG GCCCTAGAGC CATTAACATT ACCGTGCATG GACAAGTGCC GCAGGGTAAG
GCATTGACTC GTCACGGTGC AAAAGCGGGT GACTGGATTT ATGTGACCGG TACGCTCGGC
GATTCAGCAT TAGGGCTGGA TTTGATCCGT GGCGTGCAGC ATGCGCGTGC GGAGCATAAA
GAGTTCCTAA TCAATCGCCA TTATCGTCCA ACACCTCGAG TGTTAGCGGG TCAGTCGTTA
CGGTCTTTAG CATCCAGCGC CATCGACTTA TCCGACGGTT TTATTTCGGA CATTGGCCAT
ATCCTCAAAG CATCGCAGGT AGGCGCGGTT GTGGATGTAG GCTTGATTCC GTTGTCCCGC
GCCATGCAGG ATACCGTGAG CGAAGAGCAT GCCTTAGGTT ATGCGCTAAC GGGGGGCGAG
GATTATGAGC TGCTCTTTAC CGTGCCAGAG GCGCAAAAAG GTGCGTTAGA AACTGCACTG
AGCCACGCGG GGACTAAGTT TGTGCGGGTT GGACAAATTT GTGCGGGCAG TAAACTTAAG
TTGCAACTCA ATGGTGAGCC GTTTACGCCG CCATATCATG GTTTTGAGCA CTTTTAA
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| Protein sequence | MKEFQLIECY FNHRGPTRRD VKLSIGDDCA LVQPAENKSI AISCDTLVEN VHFFPDIPPQ
ALGYKALAVN LSDLAAMGAE PAWMTLALTL PEVNEAWLSG FSEGLFEAAE YYGIALIGGD
TTRGPRAINI TVHGQVPQGK ALTRHGAKAG DWIYVTGTLG DSALGLDLIR GVQHARAEHK
EFLINRHYRP TPRVLAGQSL RSLASSAIDL SDGFISDIGH ILKASQVGAV VDVGLIPLSR
AMQDTVSEEH ALGYALTGGE DYELLFTVPE AQKGALETAL SHAGTKFVRV GQICAGSKLK
LQLNGEPFTP PYHGFEHF
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