| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr4_1094 |
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| Symbol | glyA |
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| ID | 4251062 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008321 |
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| Strand | + |
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| Start bp | 1285675 |
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| End bp | 1286928 |
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| Gene Length | 1254 bp |
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| Protein Length | 417 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 638117667 |
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| Product | serine hydroxymethyltransferase |
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| Protein accession | YP_733231 |
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| Protein GI | 113969438 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0112] Glycine/serine hydroxymethyltransferase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 0.383314 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTGAAAA AAGATATGAA TATCGCAGAT TATGATCCGG AACTGTTCAA CGCAATTCAG
AACGAAACTC TGCGTCAAGA AGAGCATATT GAGCTGATTG CTTCTGAAAA CTACACCAGT
CCACGCGTGA TGCAAGCGCA AGGTTCACAA TTAACCAACA AGTACGCCGA AGGTTATCCT
GGCAAGCGTT ACTACGGTGG TTGTGAGTAT GTGGACGTAG TTGAAACCTT AGCAATTGAG
CGTGCAAAAC AACTGTTTGG TGCGACTTAC GCAAACGTGC AACCTCACTC AGGTTCTCAA
GCAAACAGCG CCGTTTACAT GGCATTGTTA AAACCAGGCG ATACCGTTTT AGGTATGAAC
CTCGCTCACG GTGGTCACTT GACCCACGGT TCACCTGTAA ACTTCTCCGG TAGACTGTAC
AACATCATTC CTTACGGCAT CGATGAATCA GGCAAAATCG ACTACGACGA AATGGAACGT
CTGGCAGTTG AACATAAGCC TAAGATGATG ATCGGTGGTT TCTCTGCTTA CTCAGGCATC
GTTGACTGGG CAAGAATGCG CGAAATCGCA GACAAAATCG GTGCTTACCT GTTTGTCGAC
ATGGCGCACG TTGCGGGTCT TATCGCCGCT GGTGTGTATC CAAACCCTGT GCCACACGCG
CACGTTGTGA CCTCAACCAC TCACAAGACC TTAGCCGGTC CTCGTGGCGG TATCATTCTG
TCTGCAGCCG ATGATGAAGA TTTATACAAA AAGCTGAACT CTGCGGTATT CCCAGGCGGT
CAAGGCGGTC CTTTGATGCA CGTTATCGCA GGTAAAGCGG TAGCCTTCAA AGAAGCTTTA
GAGCCAGAGT TCAAAGCTTA CCAACAACAA GTGGTTAAGA ACGCTAAAGC TATGGTTGAA
GTGTTCTTAG AGCGCGGTTA CAAGATCGTT TCTGGCGGTA CTGACAACCA CTTAATGCTG
GTGGACTTAA TCGGTCGCGA CCTGACGGGT AAAGAAGCCG ATGCCGCTTT AGGTAGCGCG
AACATCACAG TAAACAAAAA CTCTGTGCCT AACGATCCAC GTTCTCCATT CGTGACCTCT
GGTGTGCGTA TTGGTACGCC TGCGATCACT CGCCGCGGCT TTAAAGAAGC TGAAGCGAAA
GAGTTAACCG GTTGGATCTG TGACATCCTC GACGATGCCC ACAACCCAGC AGTCATCGAG
CGCGTAAAAG GCCAAGTATT GGCACTGTGC GCCCGTTTCC CTGTTTACGG TTAA
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| Protein sequence | MLKKDMNIAD YDPELFNAIQ NETLRQEEHI ELIASENYTS PRVMQAQGSQ LTNKYAEGYP
GKRYYGGCEY VDVVETLAIE RAKQLFGATY ANVQPHSGSQ ANSAVYMALL KPGDTVLGMN
LAHGGHLTHG SPVNFSGRLY NIIPYGIDES GKIDYDEMER LAVEHKPKMM IGGFSAYSGI
VDWARMREIA DKIGAYLFVD MAHVAGLIAA GVYPNPVPHA HVVTSTTHKT LAGPRGGIIL
SAADDEDLYK KLNSAVFPGG QGGPLMHVIA GKAVAFKEAL EPEFKAYQQQ VVKNAKAMVE
VFLERGYKIV SGGTDNHLML VDLIGRDLTG KEADAALGSA NITVNKNSVP NDPRSPFVTS
GVRIGTPAIT RRGFKEAEAK ELTGWICDIL DDAHNPAVIE RVKGQVLALC ARFPVYG
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