| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr4_1072 |
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| Symbol | |
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| ID | 4250777 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008321 |
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| Strand | - |
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| Start bp | 1254057 |
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| End bp | 1254677 |
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| Gene Length | 621 bp |
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| Protein Length | 206 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 638117645 |
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| Product | TetR family transcriptional regulator |
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| Protein accession | YP_733209 |
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| Protein GI | 113969416 |
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| COG category | [K] Transcription |
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| COG ID | [COG1309] Transcriptional regulator |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.000136093 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 39 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATGTCAA CCGTCACCCA GACGCCCTGT GTAGGTCGCC CGCGAGCCTT CGACGCCGAC
GATGCATTAG CTAAAGCCTT GGAAGTCTTC TGGCGAAAAG GTTTTGAAGG TACATCGTTA
ACCGACCTAA CTCAGGCCAT GGGCATTAAC AAACCCAGCC TGTATGCCGC CTTCGGTAAC
AAAGAGCAGC TGTTTCTGAA AGCGATCGAG TTATACGAGC AGCTCCCTTG TGCGTTTTTC
TATCCTTCCC TTGAAAAAGA AACCGCCTAT CAAGTGGCTG AATCCATGCT CTATGGCGCA
GCAACGAATT TGGTGGATAA GAATCACCCT CAAGGCTGTC TGATAGTACA AGGTGCCCTC
GCCTGTAGCG AAGCAGGGCA AGCCATTAAA GAGACTTTAA TCACCCGCCG CCGTGACGGT
GAACAGGCAC TATGCCAACG TCTGCAACGG GCAAAGGATG AAGGCGATTT ACCCGCAGAT
GCCGATCCAC TGCTGCTGTC TCGATATATA GGCACAGTGC TGCAAGGCAT GGCAGTGCAA
GCCACCAATG GCATATGCCC CGGAGAATTA CGTAAAGTCG CCGAGCTAGT GTTAGCCAAC
TTTCCGAAAA ATAATGCGTG A
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| Protein sequence | MMSTVTQTPC VGRPRAFDAD DALAKALEVF WRKGFEGTSL TDLTQAMGIN KPSLYAAFGN
KEQLFLKAIE LYEQLPCAFF YPSLEKETAY QVAESMLYGA ATNLVDKNHP QGCLIVQGAL
ACSEAGQAIK ETLITRRRDG EQALCQRLQR AKDEGDLPAD ADPLLLSRYI GTVLQGMAVQ
ATNGICPGEL RKVAELVLAN FPKNNA
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