Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewmr4_1067 |
Symbol | |
ID | 4250772 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. MR-4 |
Kingdom | Bacteria |
Replicon accession | NC_008321 |
Strand | - |
Start bp | 1249620 |
End bp | 1250033 |
Gene Length | 414 bp |
Protein Length | 137 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 638117640 |
Product | thioesterase superfamily protein |
Protein accession | YP_733204 |
Protein GI | 113969411 |
COG category | [R] General function prediction only |
COG ID | [COG0824] Predicted thioesterase |
TIGRFAM ID | [TIGR00051] acyl-CoA thioester hydrolase, YbgC/YbaW family |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 46 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCGCAAT TTAGCCCAAG TTATTCTTTC CCTGTGCAAA TTTACTATGA AGATACGGAT TTTTCTGGCG TGGTGTATCA CCCGAACTTT TTGAAATACT TCGAGCGCGC CCGTGAGCAT GTGATTGGCG CCGAGCGTTT ACGCGACCTC TGGCAACAGC AGCAATTGGG TTTTGCGGTG TATCGCAGCG ACATGTTGTG CCACGAAGGA GTGGAGTTTG CCGATATCAT CGATATCCGC ACTAAGTTCT ACTTTGAGAG TAAATATCGC ACCGTCTGGC ATCAGGAAAT TTGGCGCCCA AACGGTAAAA AACCAGCGGT TACGGCTACT ATCGAAATGG TATGTATGAA TCAAGCTCGG CAACTTGCGC CCATGCCCGC CGACTTAATT ACCCAATTAA GCCTAGGGAT GTGA
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Protein sequence | MPQFSPSYSF PVQIYYEDTD FSGVVYHPNF LKYFERAREH VIGAERLRDL WQQQQLGFAV YRSDMLCHEG VEFADIIDIR TKFYFESKYR TVWHQEIWRP NGKKPAVTAT IEMVCMNQAR QLAPMPADLI TQLSLGM
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