Gene Shewmr4_1055 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr4_1055 
Symbol 
ID4250760 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-4 
KingdomBacteria 
Replicon accessionNC_008321 
Strand
Start bp1234431 
End bp1234862 
Gene Length432 bp 
Protein Length143 aa 
Translation table11 
GC content51% 
IMG OID638117628 
ProductCBS domain-containing protein 
Protein accessionYP_733192 
Protein GI113969399 
COG category[R] General function prediction only 
COG ID[COG0517] FOG: CBS domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.53863 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones38 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCGATCA TTATCGCCGA TATTATGCGT ACCCGAGTCG TCACGGTCGA AATGGACGAT 
CGCTTAACCG TGGCGAAGGA TATTTTCGAT CAGGCAAACT TCCACCATCT GCTGGTGGTG
GATGAATATA AACTCGAAGG GGTATTGTCG GAGCGCGACT TACTCCGTGC CATCAGCCCG
AATCTGGGCA GTAGCGCCGA AACCGCTAAG GATCTCGAGA CCCTACAAAA ACGCGTCCAT
CAGGTGATGA CCCGTAATCC CGTTACTGTT GCGCCGCATG TATCGCTCGA TGCTGCGACG
CACACCCTAC TAGAACATAA TATTGGCTGT TTGCCCGTGC TCGATAATGG CGATTTAGTC
GGGATAGTGA CTTGGAAGGA TTTACTGCGA GCCTATTGTG AACACAATGA GGTCAATGAA
AGCGAGTGCT AA
 
Protein sequence
MPIIIADIMR TRVVTVEMDD RLTVAKDIFD QANFHHLLVV DEYKLEGVLS ERDLLRAISP 
NLGSSAETAK DLETLQKRVH QVMTRNPVTV APHVSLDAAT HTLLEHNIGC LPVLDNGDLV
GIVTWKDLLR AYCEHNEVNE SEC