Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewmr4_1055 |
Symbol | |
ID | 4250760 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. MR-4 |
Kingdom | Bacteria |
Replicon accession | NC_008321 |
Strand | - |
Start bp | 1234431 |
End bp | 1234862 |
Gene Length | 432 bp |
Protein Length | 143 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 638117628 |
Product | CBS domain-containing protein |
Protein accession | YP_733192 |
Protein GI | 113969399 |
COG category | [R] General function prediction only |
COG ID | [COG0517] FOG: CBS domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.53863 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 38 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCGATCA TTATCGCCGA TATTATGCGT ACCCGAGTCG TCACGGTCGA AATGGACGAT CGCTTAACCG TGGCGAAGGA TATTTTCGAT CAGGCAAACT TCCACCATCT GCTGGTGGTG GATGAATATA AACTCGAAGG GGTATTGTCG GAGCGCGACT TACTCCGTGC CATCAGCCCG AATCTGGGCA GTAGCGCCGA AACCGCTAAG GATCTCGAGA CCCTACAAAA ACGCGTCCAT CAGGTGATGA CCCGTAATCC CGTTACTGTT GCGCCGCATG TATCGCTCGA TGCTGCGACG CACACCCTAC TAGAACATAA TATTGGCTGT TTGCCCGTGC TCGATAATGG CGATTTAGTC GGGATAGTGA CTTGGAAGGA TTTACTGCGA GCCTATTGTG AACACAATGA GGTCAATGAA AGCGAGTGCT AA
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Protein sequence | MPIIIADIMR TRVVTVEMDD RLTVAKDIFD QANFHHLLVV DEYKLEGVLS ERDLLRAISP NLGSSAETAK DLETLQKRVH QVMTRNPVTV APHVSLDAAT HTLLEHNIGC LPVLDNGDLV GIVTWKDLLR AYCEHNEVNE SEC
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