| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr4_1039 |
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| Symbol | |
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| ID | 4251112 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008321 |
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| Strand | + |
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| Start bp | 1212682 |
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| End bp | 1213896 |
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| Gene Length | 1215 bp |
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| Protein Length | 404 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 638117612 |
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| Product | phosphopentomutase |
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| Protein accession | YP_733176 |
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| Protein GI | 113969383 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1015] Phosphopentomutase |
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| TIGRFAM ID | [TIGR01696] phosphopentomutase |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.536446 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 3 |
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| Fosmid unclonability p-value | 0.0000000672539 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAAACGTA CAGTTATAAT GATGTTGGAT TCCTTTGGCG TGGGCGCCGC TGGCGATGCC
GCCAAGTTTG GGGATCTAGG TTCTGATACT TTTGGCCATA TCGCTAAAGC GTGTGCCGAA
GGTAAAGCCG ATATCGGCCG TGAAGGCCCG TTAACGCTGC CAAACTTGGC GCGTTTAGGT
TTAGCCCATG CGGCGATGGA AAGCACTGGG GCGTTTGCTC CAGGCTTTGC GGACGATGTT
GAGCTGATTG GTGCCTATGG CCACGCTCAG GAATTAAGTT CGGGTAAAGA TACTCCGAGC
GGTCACTGGG AAATGGCGGG TGTGCCCGTA TTATTCGACT GGGGCTATTT CAGCGAGCAC
CAAAACTCGT TCCCTAAAGA GCTGACAGAT AAGATTCTCG CCCGTGCAGG ACTCGATGGC
TTTTTAGGTA ACTGCCATGC TTCTGGTACC ACGATTCTGG AAGAATTAGG CGAAGAGCAC
ATGCGTTCTG GCAAGCCGAT TTTTTACACT TCGGCGGATT CGGTATTCCA GATTGCCTGC
CATGAAGGCA CATTTGGTTT AGAAAATTTA TATCGTCTTT GCGAAATCGC CCGCGAAGAG
TTAGAGCCTT ACAACATTGG CCGCGTGATT GCGCGTCCAT TCGATGGCAC TGGCCCAAGC
GATTTTGCTC GTACTGGTAA CCGTAAGGAT TACTCCCTCG AGCCGCCAGC GAAGACGGTA
TTAGATAAGT TAAAAGCCGC CGGTGGTGAA GTGGTGAGTG TGGGCAAGAT TGCCGATATT
TACGCTTACT GTGGTATCAC CAAAAAGGTG AAGGCAAACG GTTTAGAAGC GCTATTTGAT
GCGACTTTAG ACGAAGTGAA ATCAGCGGGT GAAAATACTA TTGTATTCAC TAACTTTGTT
GATTTTGACT CCCACTATGG TCACCGCCGT GATGTGGCAG GTTATGCGAA AGGGCTGGAG
TATTTCGACT CGCGTTTACC TGAAATGCTC GCGCTGCTGG ATGAGGACGA TCTATTAATC
CTCACCGCTG ATCATGGTTG CGACCCAACA TGGCAAGGTA CGGATCATAC CCGTGAATAT
GTGCCTGTAT TGGCCTATGG CGCAGGGCTA AAAGCCGGTT CACTCGGTCG CCGTAACAGT
TTCGCCGATA TCGGCCAATC TATCGCAAGC TACTTCAAGC TTGAGCCGAT GGAATACGGT
GAGTCGTTTA TCTAA
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| Protein sequence | MKRTVIMMLD SFGVGAAGDA AKFGDLGSDT FGHIAKACAE GKADIGREGP LTLPNLARLG
LAHAAMESTG AFAPGFADDV ELIGAYGHAQ ELSSGKDTPS GHWEMAGVPV LFDWGYFSEH
QNSFPKELTD KILARAGLDG FLGNCHASGT TILEELGEEH MRSGKPIFYT SADSVFQIAC
HEGTFGLENL YRLCEIAREE LEPYNIGRVI ARPFDGTGPS DFARTGNRKD YSLEPPAKTV
LDKLKAAGGE VVSVGKIADI YAYCGITKKV KANGLEALFD ATLDEVKSAG ENTIVFTNFV
DFDSHYGHRR DVAGYAKGLE YFDSRLPEML ALLDEDDLLI LTADHGCDPT WQGTDHTREY
VPVLAYGAGL KAGSLGRRNS FADIGQSIAS YFKLEPMEYG ESFI
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