| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr4_1032 |
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| Symbol | |
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| ID | 4251105 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008321 |
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| Strand | + |
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| Start bp | 1203739 |
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| End bp | 1204641 |
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| Gene Length | 903 bp |
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| Protein Length | 300 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 638117605 |
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| Product | lipoprotein NlpI |
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| Protein accession | YP_733169 |
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| Protein GI | 113969376 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG4785] Lipoprotein NlpI, contains TPR repeats |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.000967145 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 4 |
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| Fosmid unclonability p-value | 0.000000287221 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAGTCTTA AAATTAGAAC CGCTGTTGTT GCTGTGCTGG CGGGTGCCAG TTTGATGTTG
GCTGGATGTG CGACCACTAA GTCTCCCTTA GACAACCAAA ATGACGTTGA AGGCAAGTTA
GTCATCGCCC CTGTGATGCC TGACTATAAA GTTGAAGTCA CCCTTGCCAA GCTGAACGAA
ATTTTATCGG CGGTTGAACT AACAAACGAG CAGCGCGCAC GTTTTCATTA CGATCGTGGC
GTGATTTACG ACAGCGTTGG TTTACGCTTA ATGGCGCGCA TCGATTTTAT GCAGGCGCTT
AAACTGCAAC CCGACTTAGC CGATGCCTAT AACTTCCTTG GTATTTATTA CACCCAAGAA
GGTGAATACG ATAGTGCCTA TGAGGCGTTT GATGGTGTAT TAGAGCTGTC GCCAAACTAT
GACTATGCCT ACTTGAATCG CGGCATTGCG CTTTATTATG GCGATCGGAA CGATCTCGCC
TTAAAAGATA TGCAAGCATT TTACGCTGGC GATAATAAAG ATGGTTATCG CGCACTGTGG
TTATATCTCA TTCAGTCAAA GGATAACGCC GAAGAAGCTA AACGTCAGTT ACAGGAACAC
CGTAAGGGAC TGGAAGCCGA TGCCTGGTCA ACCGTGATTG TTGATTATTA CCTCGGTGCT
AAGAGCCGCG AGCAGGTTTT TGCCGACGCC AAGTTAGGCC TGACTCACCC TAAAGAATAT
GCTGAGCGTC TCTGTGAAGC GTATTTCTAC CTCGCGAAAA TCGAAATTGC CAAGAATCAA
TACCAAGAGG CAGCGAATTA TTTCCGTCTT GCCCTCGCGA CCAATATCTA TGACTTTGTT
GAGCACAGAT ACGCGCGAAT TGAGCTAGCT AAAGTTAAAG GTTTGCTCGA AGGCACAAAA
TAA
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| Protein sequence | MSLKIRTAVV AVLAGASLML AGCATTKSPL DNQNDVEGKL VIAPVMPDYK VEVTLAKLNE
ILSAVELTNE QRARFHYDRG VIYDSVGLRL MARIDFMQAL KLQPDLADAY NFLGIYYTQE
GEYDSAYEAF DGVLELSPNY DYAYLNRGIA LYYGDRNDLA LKDMQAFYAG DNKDGYRALW
LYLIQSKDNA EEAKRQLQEH RKGLEADAWS TVIVDYYLGA KSREQVFADA KLGLTHPKEY
AERLCEAYFY LAKIEIAKNQ YQEAANYFRL ALATNIYDFV EHRYARIELA KVKGLLEGTK
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