Gene Shewmr4_0957 details

Gene Information

• Locus tag: Shewmr4_0957
• Symbol: dnaK
• ID: 4251608
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Shewanella sp. MR-4
• Kingdom: Bacteria
• Replicon accession: NC_008321
• Strand: +
• Start bp: 1119212
• End bp: 1121131
• Gene Length: 1920 bp
• Protein Length: 639 aa
• Translation table: 11
• GC content: 47%
• IMG OID: 638117520
• Product: molecular chaperone DnaK
• Protein accession: YP_733094
• Protein GI: 113969301
• COG category: [O] Posttranslational modification, protein turnover, chaperones
• COG ID: [COG0443] Molecular chaperone
• TIGRFAM ID: [TIGR02350] chaperone protein DnaK

Plasmid Coverage information

• Num covering plasmid clones: 17
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: 43
• Fosmid unclonability p-value: 1
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

ATGGGTAAAA TTATTGGTAT CGACTTAGGC ACAACAAACT CTTGTGTAGC TGTCCTCGAT 
GGTGGCAAAG CACGCGTATT AGAGAATGCT GAAGGCGATC GCACAACCCC GTCTATCATT 
GCTTATACCG ATGATGAGAC CATCGTGGGT CAGCCAGCAA AACGCCAAGC TGTAACTAAC 
CCAAATAACA CATTCTTCGC GATCAAGCGT TTGATCGGTC GTCGCTTCAA AGATGACGAA 
GTTCAACGTG ACGTGAACAT CATGCCATTC AAAATTATCC AAGCCGACAA CGGTGATGCT 
TGGGTTGAAT CACGTGGCAA CAAAATGGCT CCACCACAAG TTTCTGCTGA AATCTTGAAA 
AAGATGAAGA AAACAGCAGA AGACTTCTTA GGTGAAGAAG TGACAGAAGC GGTAATTACC 
GTTCCTGCAT ACTTTAACGA TTCACAACGT CAAGCCACTA AAGATGCGGG TCGCATCGCA 
GGTCTTGAAG TTAAACGTAT TATCAACGAA CCAACGGCAG CAGCACTGGC CTACGGTATC 
GATAAGAAGC AAGGCGACAA CATCGTTGCA GTGTACGACT TAGGTGGTGG TACATTCGAT 
ATCTCTATCA TCGAAATCGA CAGCAACGAC GGCGACCAAA CCTTCGAAGT ATTAGCGACT 
AACGGTGACA CTCACTTAGG TGGTGAAGAC TTTGACAACC GTTTAATCAA CTACTTAGCT 
GACGAATTCA AGAAAGAGCA AGGCTTAGAT CTGCGTAAAG ATCCATTAGC AATGCAACGT 
CTGAAAGAAG CAGCTGAGAA GGCGAAGATT GAGCTTTCAA GCACCAACCA AACTGAAGTG 
AACCTGCCAT ACATCACTGC CGATGCAACA GGTCCTAAGC ACTTAGTGGT GAAAATCACT 
CGTGCTAAGT TGGAGTCACT GGTTGAAGAC TTAATCATTC GTACTTTAGA GCCATTAAAA 
GTGGCACTGG CTGACGCTGA CTTATCAGTA TCAGACATTA ACGAAGTGAT TTTAGTGGGC 
GGTCAAACCC GTATGCCTAA GGTTCAAGAA GCAGTGACTA ACTTCTTCGG TAAAGAACCT 
CGTAAAGACG TAAACCCAGA CGAAGCCGTA GCCGTAGGTG CTGCGATTCA AGCGGGCGTA 
CTGTCAGGCG ACGTGAAAGA CGTTCTGCTG TTAGACGTAA CACCACTGTC TCTGGGTATT 
GAAACCATGG GCAGCGTAAT GACCAAGCTG ATTGAGAAAA ACACGACTAT TCCGACTAAG 
GCACAGCAAG TGTTCTCAAC AGCCGATGAC AACCAAAGCG CAGTAACCAT TCACGTACTG 
CAAGGTGAGC GTAAGCAAGC GAGCGCGAAC AAGTCATTAG GTCAGTTCAA CCTTGACGGT 
ATTGAGCCCG CACCTCGTGG CATGCCACAA ATCGAAGTGA TGTTCGATAT CGACGCTGAC 
GGTATTCTGC ATGTTTCTGC CACCGACAAG AAAACCGGTA AGAAACAAAA CATCACCATC 
AAAGCTTCTT CAGGCTTAAG CGAAGAAGAA GTGGCGCAAA TGGTACGTGA CGCTGAAGCA 
CACGCTGAAG AAGACAAGAA GTTTGAAGAG TTAGTGCAAT CTCGCAACCA AGCTGACGGC 
TTAGTTCACG CAACTAAGAA ACAAGTTGAA GAAGCGGGCG ATGCACTGCC AGCAGACGAC 
AAAGCTAAGA TTGAAGCGGC AATGAGCGCA GTTGAAGTTG CAACTAAAGG CAACGACAAA 
GAAGCCATTG AAAAAGCGAC TCAAGAGCTA ATCGAAGCGT CTGCTAAGCT GATGGAAATT 
GCTCAGGCTA AAGCTCAAAC TCAAGGCGGC GCACAAGAAG GTGCTGCTAA ACAGTCTAAC 
GCGACTGCCG ATGACGTTGT CGATGCTGAG TTTGAAGAAG TGAAAGACGA CAAGAAATAA 

 

Protein sequence

MGKIIGIDLG TTNSCVAVLD GGKARVLENA EGDRTTPSII AYTDDETIVG QPAKRQAVTN 
PNNTFFAIKR LIGRRFKDDE VQRDVNIMPF KIIQADNGDA WVESRGNKMA PPQVSAEILK 
KMKKTAEDFL GEEVTEAVIT VPAYFNDSQR QATKDAGRIA GLEVKRIINE PTAAALAYGI 
DKKQGDNIVA VYDLGGGTFD ISIIEIDSND GDQTFEVLAT NGDTHLGGED FDNRLINYLA 
DEFKKEQGLD LRKDPLAMQR LKEAAEKAKI ELSSTNQTEV NLPYITADAT GPKHLVVKIT 
RAKLESLVED LIIRTLEPLK VALADADLSV SDINEVILVG GQTRMPKVQE AVTNFFGKEP 
RKDVNPDEAV AVGAAIQAGV LSGDVKDVLL LDVTPLSLGI ETMGSVMTKL IEKNTTIPTK 
AQQVFSTADD NQSAVTIHVL QGERKQASAN KSLGQFNLDG IEPAPRGMPQ IEVMFDIDAD 
GILHVSATDK KTGKKQNITI KASSGLSEEE VAQMVRDAEA HAEEDKKFEE LVQSRNQADG 
LVHATKKQVE EAGDALPADD KAKIEAAMSA VEVATKGNDK EAIEKATQEL IEASAKLMEI 
AQAKAQTQGG AQEGAAKQSN ATADDVVDAE FEEVKDDKK