Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewmr4_0907 |
Symbol | |
ID | 4251698 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. MR-4 |
Kingdom | Bacteria |
Replicon accession | NC_008321 |
Strand | - |
Start bp | 1056711 |
End bp | 1058015 |
Gene Length | 1305 bp |
Protein Length | 434 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 638117470 |
Product | PpiC-type peptidyl-prolyl cis-trans isomerase |
Protein accession | YP_733044 |
Protein GI | 113969251 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0760] Parvulin-like peptidyl-prolyl isomerase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.00235031 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 0.382454 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAACCCA GTAAACATCT GATTTTTGCT TTATTTGCAC TCGCTATCAG CCAGCCTACT ATGGCCGCTC CCCAGCCAAT CGACCGTGTT GCCGTTCAAA TCAACGACGG TATTGTGCTC GAAAGTGAAA TCACCAACAT GATTGACACT GTAAAAGCCA ATGCGAGAGC CGCGAATCAA TCGTTGCCAT CCGACAGTGC ACTGCGTACT CAGGTTATCG AGCGACTGAT CCTCACCCGT TTGCAGTTGC AGATGGCGGA TCGTATCGGT CTGCATATCG GTGACTTACA GTTAGACCAA GCAATTGAAA ACATTGCCCG CGAACAAAAA ATGACCGTGG CGCAAATGCA GCAAAAAATC GAGAGCGAAG GGTTAAGCTT CGGCCAATAC CGCGAACAAC TGCGTGAAGA AATCACCCTG GGTGAAATCC AACGTATTCA AGTACAGCGC CGTATCCAAG TGTCACCACA GGAAATCACT GGCCTGGTAA AACTGATCCA AGAGCAAGGC ATGAAGGACG TCGAATACCA AATCGGCCAT ATCCTGATTG ACGTACCTAA CAATCCAAAC AGTGAACAAC TGGAAGCCTC GAGCAAGCGC GCAAATGCCG TACTCGAGCG TTTAAAGAGT GGTGAGGATT TCCGCCGCAC CGCCATCGCC TCTTCATCGG GTCCTAAGGC GCTGGAAGGC GGTATCTGGG ATTACATGAA CATCAACGAG ATGCCAACGC TGTTTGCTGA AGTCATCAAC GGTGCGAAAA AAGGCGATAT TATCGGCCCA ATCAAGAGTG GCGCCGGTTT CCACATTATC AAGATCATGG ATGCCCGTGG CTTACAAACC AAAGAAATTG AAGAAGTCAG AGCGCGTCAT ATCCTGCTCA AGCCATCGCC AATTCTGTCG GAAGATCGTG CTAAGGCCAT GTTAGAGCAG TTCTTAAAGC AAATTCGCTC TGGCGAAGCT AAGTTTGAAG ATTTAGCGCG TCAATATTCT GAAGATCCAG GTTCAGCAGC CAAAGGTGGT GAGCTAGGCT GGGCAGAGCC AAGCATTTAT GTGCCAGAGT TTGCGCAAAC CCTTAACAGC TTAAGCCAAG ACCAAATCAG TGAGCCTTTC CGTACGACCC ACGGCTGGCA TATCACACAG CTGGAAGAGC GCAGAAAAAC CGATGCCACG GATCAATTTA ATACTAACCG TGCTCACCAA CTGATCTTCC GTCGCAAATT TAATGAAGAA CTGCAAAACT GGCTAGACGA AATGCGTGCC GACGCATACA TTGAAGTCTT TCAGCCTGAG TCAAACCGAG GTTAA
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Protein sequence | MKPSKHLIFA LFALAISQPT MAAPQPIDRV AVQINDGIVL ESEITNMIDT VKANARAANQ SLPSDSALRT QVIERLILTR LQLQMADRIG LHIGDLQLDQ AIENIAREQK MTVAQMQQKI ESEGLSFGQY REQLREEITL GEIQRIQVQR RIQVSPQEIT GLVKLIQEQG MKDVEYQIGH ILIDVPNNPN SEQLEASSKR ANAVLERLKS GEDFRRTAIA SSSGPKALEG GIWDYMNINE MPTLFAEVIN GAKKGDIIGP IKSGAGFHII KIMDARGLQT KEIEEVRARH ILLKPSPILS EDRAKAMLEQ FLKQIRSGEA KFEDLARQYS EDPGSAAKGG ELGWAEPSIY VPEFAQTLNS LSQDQISEPF RTTHGWHITQ LEERRKTDAT DQFNTNRAHQ LIFRRKFNEE LQNWLDEMRA DAYIEVFQPE SNRG
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