| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr4_0894 |
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| Symbol | |
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| ID | 4251685 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008321 |
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| Strand | - |
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| Start bp | 1045662 |
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| End bp | 1046657 |
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| Gene Length | 996 bp |
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| Protein Length | 331 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 638117457 |
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| Product | trans-hexaprenyltranstransferase |
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| Protein accession | YP_733031 |
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| Protein GI | 113969238 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0142] Geranylgeranyl pyrophosphate synthase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.000000238398 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCCCCAC AACCAGAGTC TATTATGGAT TTAAACGCTA TTCGTCAACT GGCTGACACT
GATATGCAAG CAGTCAATCA GCTGATCTAT AAACAGCTGG AGTCAGATGT CGCCCTGATT
AACCAGTTAG GTTTCTACAT TATTAATGGT GGTGGTAAAC GTCTTCGTCC TTTACTGTCC
GTCCTCGCAG CGCGCGCCGT CGACTATCAA GGTGAAGCCC ACCTTAAGCT TGCCGCGATT
ATTGAATTTA TTCATACCGC TTCATTACTG CACGATGATG TGGTCGATGA ATCGACCCTC
AGACGCGGCC GCGAAACCGC CAACGCACTC TTTGGTAACA GCGCCAGTGT ATTAGTAGGT
GACTTCCTTT ATACCCGCTC ATTCCAAATG ATGACCGAAC TCGACAGCAT GCGAGTGCTG
CGTGTATTAG CCGATACCAC TAACGTATTG GCCGAAGGTG AAGTATTACA GCTAATGAAC
TGTAACGATC CTAATACCAC AGAAGAAAGC TATATGCGGG TGATCTATTG CAAGACCGCC
AAGCTATTCG AAGCCGCCAC GTTACTGGCC GCGGTATTAG CCGGCGCTAC ACCCGAGCAA
GAAACCGCAT TAGGCGACTA TGGTAAGTAT TTAGGCACCG CCTTCCAGCT GACCGACGAT
TTGCTCGACT ACACCGCCGA CAGTGAAGAG TTAGGTAAAA ACATCGGTGA TGATCTCGCC
GAAGGTAAAC CGACCTTACC GCTGATCTAT GCCATTGCCC ATGGCACAGA AGAAGAGCAG
CAACTCATTC GCCAAGCCAT TGAGCAAGGT GATGGCACCC ACGCCATTGA GAAAATAGTT
GCCGCTCTGC ATCACTGCGG CGCGCTCACT TACACTCAGC AAAAAGCTAT TGAAGAATCA
AATAAAGCGA TTGCGGCGCT GGCAGTATTA CCCGACAGTG ATTTCAAAAC CGCATTAATC
TCACTGGCGA AAATCTCCGT TGATCGTAAC CACTAA
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| Protein sequence | MAPQPESIMD LNAIRQLADT DMQAVNQLIY KQLESDVALI NQLGFYIING GGKRLRPLLS
VLAARAVDYQ GEAHLKLAAI IEFIHTASLL HDDVVDESTL RRGRETANAL FGNSASVLVG
DFLYTRSFQM MTELDSMRVL RVLADTTNVL AEGEVLQLMN CNDPNTTEES YMRVIYCKTA
KLFEAATLLA AVLAGATPEQ ETALGDYGKY LGTAFQLTDD LLDYTADSEE LGKNIGDDLA
EGKPTLPLIY AIAHGTEEEQ QLIRQAIEQG DGTHAIEKIV AALHHCGALT YTQQKAIEES
NKAIAALAVL PDSDFKTALI SLAKISVDRN H
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