Gene Shewmr4_0826 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr4_0826 
Symbol 
ID4251966 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-4 
KingdomBacteria 
Replicon accessionNC_008321 
Strand
Start bp969416 
End bp970474 
Gene Length1059 bp 
Protein Length352 aa 
Translation table11 
GC content51% 
IMG OID638117389 
Productpeptide chain release factor 2 
Protein accessionYP_732963 
Protein GI113969170 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG1186] Protein chain release factor B 
TIGRFAM ID[TIGR00020] peptide chain release factor 2 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.0335049 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGCCGAGCG TACGCAGCTT CTTAGGGGGT ATCTTTGACT ACGATGCTAA GCATGAGCGT 
CTAGAAGAAG TCAGCCGTGA ACTTGAAAGT TCTGAGGTGT GGAACGAGCC AGAACGTGCT
CAAGCCCTAG GTAAAGAGCG CGCCAGCCTC GAAGCCGTCG TAAAAACTAT CGATGATATG
GACTCAGGTC TAGAAGACGT TGAAGGTCTG CTAGAGCTTG CCATCGAAGA AGAAGACGAA
GACACCTTCA ATGAAACCAC CAAAGAGCTG GATTATTTAG AGAGCCGTTT GGCCGAACTC
GAATTCCGCC GTATGTTCTC TGGTCCACAG GACGCCTCAA ACTGTTACTT AGACATTCAG
TCGGGCAGTG GTGGTACCGA GGCGCAAGAC TGGGCCAACA TGGTACTGCG TATGTATCTG
CGTTGGGGCG AAGCCCACGG ATTCAGCCCT GAGCTGATGG AAGTGACCGA CGGTGACGTG
GCCGGCATTA AGGGCGCGAC CATTAAATTT ACCGGTGAGT ATGCCTTCGG TTGGTTACGT
ACCGAAACTG GCGTGCACCG TTTAGTGCGT AAATCGCCAT TCGACTCATC GGGTCGTCGC
CATACCTCTT TCTGCTCGGT ATTCGTTTAC CCAGAGATTG ATGACGATAT CACCATCGAT
ATCAATCCTG CTGACTTACG TATCGACGTA TACCGCGCCT CGGGTGCGGG TGGTCAGCAC
GTTAACCGAA CCGAATCTGC GGTACGTATT ACCCACTTAC CGACTAACAC GGTAGTGCAG
TGCCAGAACG ACCGTTCACA GCACAAGAAC AAAGATTCGG CGATGAAACA GTTAAAAGCC
AAACTGTTCG AATTAGAAAT GCATAAGCAA AATGCGGAAA AACAAGCCGC CGAAGATGCC
AAATCTGACA TCGGTTGGGG CAGCCAGATC CGTTCTTATG TATTGGATGA TTCCCGTATT
AAAGACTTAC GCACTAGCGT GGAGACGCGC AATACCCAAG CGGTACTCGA TGGCGATCTG
GACAAGTTTA TCGAAGCCAG TTTGAAATCA GGGCTGTAA
 
Protein sequence
MPSVRSFLGG IFDYDAKHER LEEVSRELES SEVWNEPERA QALGKERASL EAVVKTIDDM 
DSGLEDVEGL LELAIEEEDE DTFNETTKEL DYLESRLAEL EFRRMFSGPQ DASNCYLDIQ
SGSGGTEAQD WANMVLRMYL RWGEAHGFSP ELMEVTDGDV AGIKGATIKF TGEYAFGWLR
TETGVHRLVR KSPFDSSGRR HTSFCSVFVY PEIDDDITID INPADLRIDV YRASGAGGQH
VNRTESAVRI THLPTNTVVQ CQNDRSQHKN KDSAMKQLKA KLFELEMHKQ NAEKQAAEDA
KSDIGWGSQI RSYVLDDSRI KDLRTSVETR NTQAVLDGDL DKFIEASLKS GL