Gene Shewmr4_0777 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr4_0777 
Symbol 
ID4251499 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-4 
KingdomBacteria 
Replicon accessionNC_008321 
Strand
Start bp904620 
End bp905357 
Gene Length738 bp 
Protein Length245 aa 
Translation table11 
GC content46% 
IMG OID638117340 
Producthypothetical protein 
Protein accessionYP_732914 
Protein GI113969121 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG3137] Putative salt-induced outer membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.0484485 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGAAAG TACTGACCGC AGCACTATTA ATGACGGCAC CATTTATGGC GAATGCGGGA 
GCCGATTTTG TTAAAGGCGA TAGGACATTC GCAGGCGAAG CCGAGTTAGG TGCAACCTTA
ACCACAGGTA ACACCGATAC CTCATCCTAT AAGGGTCGCT TAAGCCTTAA ACATGAATTG
GGTGACTGGG AAAACCAATA TCTTTTAGAA GGTTTGTATA AAGAAGATAC GGGTGAAGTG
ACCGCTAAGC GTTATTTAGC GGGCGCACAG GGTAACTATA AAATGACAGA TCGCAGCTAT
CTGTTTGCCA ACGCTAACTA TGAAGTTGAC CCTTTTACCG GTTATGACTA TACAGCCTCT
GGGGCCGCGG GTTATGGTCA CAGACTCTAT GACACCAGCA AAACATTTTT AGATGTGGAA
ATCGGTCCCG GTTACATCTA TCAGCGCCTC GATTCAGAGC AAGCGCTGTT AGAAGGCACA
GATTCGAATG ACAGTGTGGT TGCCCACGGT GTGATCAACT TCGAAACTGA AATCACAGAA
ACCTCAAAAT TCCAGCAACG TTTTGTGGCC GACTATGGCG ATAAATTGGA TGCGCGTTCA
GAAACCTCGC TCACGGCCAA TATCATTGGC GCCTTGGCGA TGAAGTTTGC GATTATTGTG
CGCTACAACA GTGAGCCACT GGACGATAAA AAGAGCACTG ATACCGAAAC GAATATGACC
TTGCTCTATT CGTTCTAA
 
Protein sequence
MKKVLTAALL MTAPFMANAG ADFVKGDRTF AGEAELGATL TTGNTDTSSY KGRLSLKHEL 
GDWENQYLLE GLYKEDTGEV TAKRYLAGAQ GNYKMTDRSY LFANANYEVD PFTGYDYTAS
GAAGYGHRLY DTSKTFLDVE IGPGYIYQRL DSEQALLEGT DSNDSVVAHG VINFETEITE
TSKFQQRFVA DYGDKLDARS ETSLTANIIG ALAMKFAIIV RYNSEPLDDK KSTDTETNMT
LLYSF