Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewmr4_0753 |
Symbol | |
ID | 4251439 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. MR-4 |
Kingdom | Bacteria |
Replicon accession | NC_008321 |
Strand | + |
Start bp | 875251 |
End bp | 876468 |
Gene Length | 1218 bp |
Protein Length | 405 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 638117316 |
Product | Na(+)-translocating NADH-quinone reductase subunit F |
Protein accession | YP_732890 |
Protein GI | 113969097 |
COG category | [C] Energy production and conversion |
COG ID | [COG2871] Na+-transporting NADH:ubiquinone oxidoreductase, subunit NqrF |
TIGRFAM ID | [TIGR01941] NADH:ubiquinone oxidoreductase, Na(+)-translocating, F subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 29 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGAAATGG CAATAGGCAT AGGCATGTTC ACCTTAGTGG TGTGCCTACT GGTGATAGTA ATCCTTATCG CCAAAAAGAA ATTAGTGACT ACCGGTGAGA TCACTATCGG GATTAACGAC GATGCCGAGA AAAGCATTAA AGTTGCCGCG GGCGACAAAC TGCTTGGCGC CTTGGCGAGT AAGAATATTT TTATTCCCTC GGCCTGTGGC GGCGGCGGTA CCTGCGGCCA GTGCCGGGTG AAAGTCAAAT CGGGCGGTGG TGATATTCTG CCAACAGAAC AAGGGCATAT CACTAAAAAA GAAGCCAAAG AAGGTTGTCG TCTCGCCTGC CAAGTCGCGG TGAAAACCGA TATGGAACTT GAGCTAGAGG AAGAAATATT CGGTGTGAAG AAGTGGCAAT GTGAGGTGAT CTCAAACGAT AACAAGGCCA CCTTTATCAA AGAGTTATTG CTAAAACTGC CCGAGGGTGA AGACGTACAC TTCAAGGCGG GTGGCTATAT TCAAATTGAA GCGCCAGCCC ATGTGGTGAA GTATGCCGAT TTTGATATTC CGGCTAAGTA CCGCGACGAT TGGGAAAAAT ACGGCCTGTT CGACTTAGTT TCCACCGTCA ATGAAGACGT GCTGCGCGCC TATTCGATGG CGAACTATCC CGATGAAAAG GGCCGCATCA TGCTTAACGT GCGGATTGCC ACGCCACCAT CGGCCAATGT GCCACCGGGT AAGATGTCTT CTTACATCTT TAACCTCAAG GCGGGGGATA AGGTGACCAT CTCTGGCCCA TTCGGCGAGT TCTTTGTGAA AGAAACCGAT GCGGAAATGG TATTTATCGG CGGTGGTGCG GGTATGGCAC CGATGCGCTC GCATATTTTC GATCAGCTAA AGAGTAAAAA GACCAAGCGT AAGATGAGCT TCTGGTACGG CGCACGCTCA AGCCGCGAAG TGTTTTACCA GCAGGACTTC GACACCTTGG CCGCCGAGAA CGACAACTTC GTCTGGCATG TGGCGTTGTC TGAGCCGCTG CCAGAGGATA ATTGGACGGG TTACACTGGC TTTATTCATA ATGTGCTCTA TGAGAATTAT CTTAAAAATC ACAAGGCACC AGAGGATTGT GAGTTCTATA TGTGTGGCCC ACCGATCATG AACTCCTCGG TGATCCGTAT GCTCGAAAGC CTAGGGGTCG AGCCTGAAAA TATCCTGCTC GATGACTTTG GTGATTAA
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Protein sequence | MEMAIGIGMF TLVVCLLVIV ILIAKKKLVT TGEITIGIND DAEKSIKVAA GDKLLGALAS KNIFIPSACG GGGTCGQCRV KVKSGGGDIL PTEQGHITKK EAKEGCRLAC QVAVKTDMEL ELEEEIFGVK KWQCEVISND NKATFIKELL LKLPEGEDVH FKAGGYIQIE APAHVVKYAD FDIPAKYRDD WEKYGLFDLV STVNEDVLRA YSMANYPDEK GRIMLNVRIA TPPSANVPPG KMSSYIFNLK AGDKVTISGP FGEFFVKETD AEMVFIGGGA GMAPMRSHIF DQLKSKKTKR KMSFWYGARS SREVFYQQDF DTLAAENDNF VWHVALSEPL PEDNWTGYTG FIHNVLYENY LKNHKAPEDC EFYMCGPPIM NSSVIRMLES LGVEPENILL DDFGD
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