| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr4_0718 |
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| Symbol | |
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| ID | 4251159 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008321 |
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| Strand | - |
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| Start bp | 837311 |
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| End bp | 838540 |
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| Gene Length | 1230 bp |
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| Protein Length | 409 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 638117281 |
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| Product | D-3-phosphoglycerate dehydrogenase |
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| Protein accession | YP_732855 |
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| Protein GI | 113969062 |
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| COG category | [E] Amino acid transport and metabolism
[H] Coenzyme transport and metabolism |
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| COG ID | [COG0111] Phosphoglycerate dehydrogenase and related dehydrogenases |
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| TIGRFAM ID | [TIGR01327] D-3-phosphoglycerate dehydrogenase |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.0566439 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 33 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCGAAAC ATTCGCTGGA CAAGGATAAG ATCAAGATCC TGTTGTTGGA AGGCGTCCAC
CAATCTGCGG TCGATGTATT TGAACGTGCT GGATACACCA ATATCGAGTA TCACAAAGCC
TCCTTAGGTG ATGAAGCCCT GCTCGAGTCC ATCAAAGATG CTCACTTTGT TGGTATTCGT
TCCCGTACCC AATTGACCGC TGACGTGTTA AAACGTGCCG AAAAACTGAT TGCGATTGGT
TGTTTCTGTA TCGGCACTAA CCAGGTGGAT CTGGCGACCG CCGAATTGCT CGGTATCCCG
GTATTTAACG CACCGTTTTC TAATACCCGC AGCGTAGCTG AACTGGTATT AGGCGAAATC
ATCATGTTGA TGCGCGGCAT TCCTGAGCGT AATGCGATTG CCCACCGTGG TGGCTGGATG
AAGACAGCCG CAGGCAGTTA CGAAGTCCGT GGCAAAACCT TAGGTGTGAT AGGTTATGGC
CATATTGGTA CTCAGCTAGG GATCTTGGCT GAAACCTTAG GTATGCGCGT GGTGTTTTTC
GATATCGAAG ACAAACTGCC ATTAGGTAAC GCTCAGCAAA TCCATTCGAT GGAACAATTA
CTGGCACAGT CCGATGTGGT GAGCTTACAC GTCCCTGAGA CAGCGCAAAC TAAAGATATG
ATCAGCGCAG CAGAATTTGC AGCCATGCGT AAAGGCAGCA TCTTCATCAA CGCCTCACGC
GGCACTGTGG TTGATATCGA TGCCCTGACG GTTGCCCTTA AAGAGCGTCA CCTTGCGGGC
GCGGCAATCG ACGTATTCCC TGTCGAGCCA CAATCGAATG ATGATGAATT TATCAGCCCA
TTACGTGGCT TAGACAATGT GCTATTGACC CCGCACGTGG GCGGCAGTAC TGCTGAAGCC
CAAGAAAATA TCGGTATCGA AGTGGCTGGT AAGTTAGCCA AATACTCAGA TAACGGTTCG
ACCGTTTCTG CGGTTAACTT CCCTGAAGTG TCGCTGCCAA TGCACAAAGG CATTTCGCGC
TTGCTGCACA TTCACCAAAA CCGTCCTGGC GTGCTGATCA AAATCAACAA AGCTTTCTCT
GAAAAAGGCA TCAACATTGC CGCTCAGTAT CTGCAAACCA CTGCTGAAAT CGGTTATGTG
GTGATGGAAG TCGATACTCA CCAAGCCGAG GAAGCACTGG TCGAACTTAA GGCCATTGAA
GGCACTCTGC GCACCCGCGT ATTGTTCTAA
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| Protein sequence | MAKHSLDKDK IKILLLEGVH QSAVDVFERA GYTNIEYHKA SLGDEALLES IKDAHFVGIR
SRTQLTADVL KRAEKLIAIG CFCIGTNQVD LATAELLGIP VFNAPFSNTR SVAELVLGEI
IMLMRGIPER NAIAHRGGWM KTAAGSYEVR GKTLGVIGYG HIGTQLGILA ETLGMRVVFF
DIEDKLPLGN AQQIHSMEQL LAQSDVVSLH VPETAQTKDM ISAAEFAAMR KGSIFINASR
GTVVDIDALT VALKERHLAG AAIDVFPVEP QSNDDEFISP LRGLDNVLLT PHVGGSTAEA
QENIGIEVAG KLAKYSDNGS TVSAVNFPEV SLPMHKGISR LLHIHQNRPG VLIKINKAFS
EKGINIAAQY LQTTAEIGYV VMEVDTHQAE EALVELKAIE GTLRTRVLF
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