| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr4_0690 |
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| Symbol | |
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| ID | 4251534 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008321 |
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| Strand | - |
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| Start bp | 797914 |
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| End bp | 798645 |
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| Gene Length | 732 bp |
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| Protein Length | 243 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 638117253 |
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| Product | 16S ribosomal RNA methyltransferase RsmE |
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| Protein accession | YP_732827 |
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| Protein GI | 113969034 |
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| COG category | [S] Function unknown |
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| COG ID | [COG1385] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | [TIGR00046] RNA methyltransferase, RsmE family |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.000126975 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 0.647464 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGAGTTC CAAGAATTTA TCAACCTCAA CCATTAGCCG TAAATCAACA GCTGAATTTA
GATGAGGATG GCGCAGCCCA TATTGGCAAA GTGTTGCGTA TGGGCAGTGG CGAACACATT
AGCCTGTTTA ATGGCGATGG TAATGATTAT CTTGCCGAAA TTGTCGATGC GGGTAAAAAA
TCGGTCACGG TAAAAGTGCT CTCCTGTGAG GCTAATCCAT CGGAATCGCC CCTCAACCTG
CATTTAGGCC AAGTGATTTC CCGCGGCGAT CGGATGGAGT TCACCATTCA AAAATCCGTT
GAGCTAGGGG TGAATACCAT TACGCCACTG TTTTCTGACC GCTGCGGCGT CAAACTCACT
GGTGAGCGTC TCGAAAAGAA AATCCAGCAA TGGCAAAAGA TTGTGATCAG CGCCTGTGAG
CAATCTGGCC GTAGCCAAGT GCCCATCGTT CGCCCCGCCA TGGAATTACA GGAATGGTGC
AGCGAACCGA CCAGCGCACT CAAACTCAAC TTGCACCCAA GAGCAGCGCA CGGTATCAAT
GGCTTAGATT TATCCCATAC CCGTGTACGC CTGCTGATCG GCCCCGAAGG GGGATTATCG
GCGGAAGAAA TCGCCATGAC GGAAACCTAC CAGTTTACCG ATGTGTTACT CGGCCCCCGA
GTGCTGCGCA CCGAAACCGC CTCACTCACG GCGATTACCG CGCTGCAACT TAGATTCGGT
GACTTAGGTT AA
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| Protein sequence | MRVPRIYQPQ PLAVNQQLNL DEDGAAHIGK VLRMGSGEHI SLFNGDGNDY LAEIVDAGKK
SVTVKVLSCE ANPSESPLNL HLGQVISRGD RMEFTIQKSV ELGVNTITPL FSDRCGVKLT
GERLEKKIQQ WQKIVISACE QSGRSQVPIV RPAMELQEWC SEPTSALKLN LHPRAAHGIN
GLDLSHTRVR LLIGPEGGLS AEEIAMTETY QFTDVLLGPR VLRTETASLT AITALQLRFG
DLG
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