| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr4_0682 |
|---|
| Symbol | |
|---|
| ID | 4251893 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella sp. MR-4 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008321 |
|---|
| Strand | + |
|---|
| Start bp | 789361 |
|---|
| End bp | 790014 |
|---|
| Gene Length | 654 bp |
|---|
| Protein Length | 217 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 46% |
|---|
| IMG OID | 638117245 |
|---|
| Product | toluene tolerance family protein |
|---|
| Protein accession | YP_732819 |
|---|
| Protein GI | 113969026 |
|---|
| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
|---|
| COG ID | [COG2854] ABC-type transport system involved in resistance to organic solvents, auxiliary component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 26 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 22 |
|---|
| Fosmid unclonability p-value | 0.617066 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTTGAAAC GCTTATCGCG CTTTTTACTG CCGTTAGTAT GGATATTTAC TGCAACGACC
GCACTGGCGG ATGATGCCAC TGTTAACACT ATGGACCCTT ACGCCATGGT CAAATCCGTT
GCCAACAAAA CCTTCGACCG CTTTCATCAA GATAAAGCCT TGATCGATGC CGATGCAGAT
CATCTTAAGG TGATCGTGCG TGAAGAGTTG ATGCCTTACA TCGACTATAA ATACGCTTCA
TACAAAGTGT TAGGCCAGTA TTTAAAAGAG TCGACCGAAG ATCAGCGCAA TCGCTTCGTC
GATGCCTTCG AAGGTTACCT GGTCTCAACC TATGCCCAAG CTTTTACTGA ATACACTAAC
CAAAAAGTGG AGTTTTCTCC CGGTAGTGAT TTCAGCAATG AGAAGATTGT CGACGTAAAC
GTACAGATTA TCGAAGCGGG TCGTCCGCCG ATTAAGCTGT TGTTTAAAGT GCGTCGCCTC
AAGGATGACT CTTGGAAGGC GTTTGACTTA GTTGCCGAAG GCGTGAGTTT GCTGTCCTCT
AAGCAATCTG AAATCTCGAA TCTTATCCGC CAACAGGGGA TTGATGCCGT GATCAAGATG
CTGGAAGAGC GCACCAAAGA CAAAGTGACT AAACAGCCTA AAGCAGGGAA GTAA
|
|---|
| Protein sequence | MLKRLSRFLL PLVWIFTATT ALADDATVNT MDPYAMVKSV ANKTFDRFHQ DKALIDADAD
HLKVIVREEL MPYIDYKYAS YKVLGQYLKE STEDQRNRFV DAFEGYLVST YAQAFTEYTN
QKVEFSPGSD FSNEKIVDVN VQIIEAGRPP IKLLFKVRRL KDDSWKAFDL VAEGVSLLSS
KQSEISNLIR QQGIDAVIKM LEERTKDKVT KQPKAGK
|
|---|
| |