Gene Shewmr4_0668 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr4_0668 
Symbol 
ID4251879 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-4 
KingdomBacteria 
Replicon accessionNC_008321 
Strand
Start bp778276 
End bp779640 
Gene Length1365 bp 
Protein Length454 aa 
Translation table11 
GC content52% 
IMG OID638117231 
Productmagnesium transporter 
Protein accessionYP_732805 
Protein GI113969012 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG2239] Mg/Co/Ni transporter MgtE (contains CBS domain) 
TIGRFAM ID[TIGR00400] Mg2+ transporter (mgtE) 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.175865 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCTGTAG AAGCCTCAGA CAGCTTACAA GTCGAACAAC GTCTCGACCA ACTGAGCCAT 
GCCCTCAATA GCGGTATGTT TGTGCATGTC AGGCAAATGC TGCAAAACAT GGCGGCGTCA
GATATCGCAT TGATTCTAGA GTCCTCGCCC CCTAAGGCAC GGCAAGTGTT ATGGCAACTT
ATCGATCAAG ATCAGCTCGG GGATATTCTC GATGAACTCA GTGAAGAGTT AAAAGATCCG
CTTATCCGCG CTATGAGCCC AGAGCGAGTC GCCAAAGCCA CCGCCAGCAT GGATACGGAC
GATCTCGCTT ATATTCTGCG AAGCTTGCCG GATACCGTCT ATAAGCAAGT ATTGCAGTCA
ATGAGTCTGC AAAACCGCCA GCGGGTCGAG CAGGCGCTCT CCTACCCCGA TGAAACCGCG
GGCAGCTTAA TGAACACAGA TACTGTGACC TTAAGACCCG ATGTAAATAT CGATGTGGTA
CTGCGTTATT TGCGCCAACG GGGCAACCTG CCCGACACCA CTGACACCTT ATACGTGGTG
GATAAGCACG ATCGCGTACT CGGCGGGGTA AAGCTTGCGG ATCTGCTCAC CTGCGATCCC
AATACTCATA TCAGCAGCAT TATCGATACC GATATCGAGA GCATTCCCGT GGGCATGTCC
GACAGCGAAG TGGCGCAACT TTTCGAGCGC CATGACTGGG TATCGGCGCC CGTGGTCGAT
AGTGAGGGCA AGTTACTCGG GCGTATTACC ATCGATGACG TGGTCGATGT TATCCGTGAA
GATGCCGAAC ATTCCATGAT GGGGATGGCG GGGATGGATG ACGATGAAGA CACCTTCGCC
CCTGTGGTAA AGAGTACCTT ACGCCGCTCA CTCTGGTTGA CGATTAACCT GTTTGCCGCC
CTGCTGGCGG CCTCTGTCAG CAATATGTTT GAAGGCACAA TCGAACAATT CGCCACGATT
GCGATTTTAA TGACGATTGT ACCGAGCATG GGCGGGGTCG CGGGCAATCA AACCTTAGCC
CTAGTGATCC GCGGGATCGC CTTAGGCCAT ATTGGCCAGA GTAACGCCCG CTGGCTGATT
GGCAAAGAAC TCGCCATTGG CTTTTTGAAC GGCCTCATGT GGTCGATTTT GGTGTTTATC
GCGGTATTAG TTTGGAAAGA TGATATGGCG CTTGCCAGCC TAATTGGCGG CGCAATGCTC
ATCAATATGA CAGTCGCTGG ACTGGCTGGC GCCAGTATTC CGCTGATCTT AAAGCGTTTA
AAAGTAGATC CGGCGTTAGC GGGCGGTATG GTACTCACCA CAGTCACCGA TGTTATTGGC
CTGTTTGCCT TCTTAGGATT AGCGACTTTA TATTTAATGC ACTAG
 
Protein sequence
MPVEASDSLQ VEQRLDQLSH ALNSGMFVHV RQMLQNMAAS DIALILESSP PKARQVLWQL 
IDQDQLGDIL DELSEELKDP LIRAMSPERV AKATASMDTD DLAYILRSLP DTVYKQVLQS
MSLQNRQRVE QALSYPDETA GSLMNTDTVT LRPDVNIDVV LRYLRQRGNL PDTTDTLYVV
DKHDRVLGGV KLADLLTCDP NTHISSIIDT DIESIPVGMS DSEVAQLFER HDWVSAPVVD
SEGKLLGRIT IDDVVDVIRE DAEHSMMGMA GMDDDEDTFA PVVKSTLRRS LWLTINLFAA
LLAASVSNMF EGTIEQFATI AILMTIVPSM GGVAGNQTLA LVIRGIALGH IGQSNARWLI
GKELAIGFLN GLMWSILVFI AVLVWKDDMA LASLIGGAML INMTVAGLAG ASIPLILKRL
KVDPALAGGM VLTTVTDVIG LFAFLGLATL YLMH