| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr4_0619 |
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| Symbol | |
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| ID | 4251516 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008321 |
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| Strand | + |
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| Start bp | 713835 |
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| End bp | 714614 |
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| Gene Length | 780 bp |
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| Protein Length | 259 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 638117182 |
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| Product | Sel1 domain-containing protein |
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| Protein accession | YP_732756 |
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| Protein GI | 113968963 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0790] FOG: TPR repeat, SEL1 subfamily |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.0168047 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAAATACA GACGATGGGT TTTAGGCGCC GGATTCACTT TATCCCTAGG GATGAGTGCT
GCCGCGCACG CATTTTCTAT TCCACAGCCA GCCAATGAAG TCGCGGCGAG TAAATTTGTG
CACATTCAAG TGCAGGCGGA GCAGGGCGAT GCCGACGCAC AATTTTTACT GGGGCTGATG
TTTCTCTCTG GACGTTATGT ACAGCAAGAA GTGCCGACCG GATTACATTG GATGACCCTT
GCCGCCGAGC AGCAACACGA AAAGGCGCAG CAAACCTTAG CGGATCTCTC CTTTGAGGGG
CAGCTAGTAA AGCGTGACTT AGCCGTGGCC GAACGTTGGT ATAAGGATAT GGGCGAGCGT
GGTAATCGCT GGGCGCAGTT CCGTTTAGGC TTTATTTATG CCTCGGGTGG CGATGGCATT
GCGCGTAACT GCGGTAAAGC CGTGGAGCAA TTTACCCGCG TGGGGGATGA TGTTGCCCTT
GGCAATGTGG CGTGGATTTT AGCGACTTGC CCCGAAGCCG AATATCGCGA TGGTAATAAA
GCGCTCGAAT TATCCTTGCA GCTGCTGAAA GTGAACGAGA ACGACCCTAC CAACCTCGAT
AACTTGGCGG CCGCCTATGC CGAAGTCGGT GATTTTGGCG CCGCGGTATC GACCCAGCAA
AAAGCGATAG CTGCCTTAAA GATGACGGCC GAAGCCGCTA AGACTGACGA GTTTCAGCAG
CGTCTGCACA GCTATGAGCA AAAGCGCGCT TACCGTGAGA CCTTGCGTTT ACTCGATTAA
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| Protein sequence | MKYRRWVLGA GFTLSLGMSA AAHAFSIPQP ANEVAASKFV HIQVQAEQGD ADAQFLLGLM
FLSGRYVQQE VPTGLHWMTL AAEQQHEKAQ QTLADLSFEG QLVKRDLAVA ERWYKDMGER
GNRWAQFRLG FIYASGGDGI ARNCGKAVEQ FTRVGDDVAL GNVAWILATC PEAEYRDGNK
ALELSLQLLK VNENDPTNLD NLAAAYAEVG DFGAAVSTQQ KAIAALKMTA EAAKTDEFQQ
RLHSYEQKRA YRETLRLLD
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