Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewmr4_0602 |
Symbol | |
ID | 4251183 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. MR-4 |
Kingdom | Bacteria |
Replicon accession | NC_008321 |
Strand | + |
Start bp | 695666 |
End bp | 696256 |
Gene Length | 591 bp |
Protein Length | 196 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 638117165 |
Product | ubiquinol-cytochrome c reductase, iron-sulfur subunit |
Protein accession | YP_732739 |
Protein GI | 113968946 |
COG category | [C] Energy production and conversion |
COG ID | [COG0723] Rieske Fe-S protein |
TIGRFAM ID | [TIGR01409] Tat (twin-arginine translocation) pathway signal sequence [TIGR01416] ubiquinol-cytochrome c reductase, iron-sulfur subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 2 |
Plasmid unclonability p-value | 0.00000122826 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 0.0250756 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCAATG CGCCAGTCGA TACCGGACGT CGCAGATTCC TGACAGCCGC AACCGCCGTA GTAGGTGGTG CTGGTGCCGT CGCTGTAGCG GTTCCTTTCA TCAAGTCATG GAATCCGAGT GCCAAGGCGA AAGCTGCAGG TGCACCGGTC GAAGTAAATA TCAGTAAAAT TGAGCCAGGT CAGCTGATCC GTGTTGAATG GCGTGGAAAA CCTGTATGGG TTGTCCGTCG CACAGAAGCG GTTATCAATG AACTGCCAAC ACACGACGAT AAGTTAAGAG ATCCAGCTTC TGCTGAAATG CAGCAACCTG AATATGCAAC AAATCCTCTG CGTTCTATTA AGCCAGAGTA TTTTATTGCC GTCGGTATTT GTACCCATCT AGGATGTTCA CCTACTTATT TGCCAGATTC ATTTGCTGAG CAAGTTCAAG GTGTGACTTC TGGTTTCTTC TGTCCATGTC ATGGTTCTAA GTTCGATATG GCGGGCCGCG TATTCCAAGG CGTTCCAGCT CCATTGAACC TAGTTATCCC TCCACATCAA TACGTTGATG ATGGCACCGT TATCATCGGT GTAGATAAAG GAGTGGCGTA A
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Protein sequence | MSNAPVDTGR RRFLTAATAV VGGAGAVAVA VPFIKSWNPS AKAKAAGAPV EVNISKIEPG QLIRVEWRGK PVWVVRRTEA VINELPTHDD KLRDPASAEM QQPEYATNPL RSIKPEYFIA VGICTHLGCS PTYLPDSFAE QVQGVTSGFF CPCHGSKFDM AGRVFQGVPA PLNLVIPPHQ YVDDGTVIIG VDKGVA
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