| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr4_0600 |
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| Symbol | |
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| ID | 4251181 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008321 |
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| Strand | + |
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| Start bp | 693253 |
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| End bp | 694398 |
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| Gene Length | 1146 bp |
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| Protein Length | 381 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 638117163 |
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| Product | HflK protein |
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| Protein accession | YP_732737 |
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| Protein GI | 113968944 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0330] Membrane protease subunits, stomatin/prohibitin homologs |
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| TIGRFAM ID | [TIGR01933] HflK protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.0138092 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.00143389 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGGCTTGGA ACGAGCCCGG TAACAAGGGT AATGATCCTT GGGGAAATAA AGGTGGTAAC
GACAAAGGAC CACCGGACCT TGATGAGGTT TTTCGTAATC TTTCAAAACG CTTTGGCGGC
AAAGGCAATG GCTCATCAGG CCAGAACTTT AGTTCGTTTA GCGTAATCAT CATTCTTGCC
ATCGCTTTTG TTGTTTGGGG ACTCTCGGGT TTTTACACCA TTAAAGAAGC TGAGCGTGGT
GTCGCGCTGC GTTTTGGTCA GCATATTGGT GAAGTGGGCC CAGGTCTGCA TTGGAAAGCC
ACTTTTATCG ACCAGATTTA CCCTGTTGAT GTGCAATCTG TCCGCTCTAT TCCTGCCTCA
GGCAGTATGT TGACCTCAGA TGAAAACGTC GTAAAGGTAG AGTTGGACGT ACAGTATCGT
ATTTTAGATG CGTACTCTTA TCTGTTCAGT GCAGTTGATG CCAATGCCAG CTTACGTGAA
GCCACAGACA GTGCGCTGCG TTATGTCATC GGCCACAACA AAATGGACGA TATTCTAACC
ACGGGTCGTG ATGCCATTCG TCGTGATACT TGGAAAGAGT TAGAGCGCAT AATTGAGCCG
TACAAATTAG GCTTAGCCAT TGTTGACGTT AACTTTTTGC CAGCTCGTCC ACCTGAAGAA
GTGAAAGATG CTTTCGATGA TGCGATTGCG GCTCAAGAAG ACGAACAGCG CTTTATCCGT
GAAGCAGAAG CTTATGCCCG TGAAGTTGAG CCTAAAGCGC GCGGTGAAGT CGAGCGTATG
GCACAACAAG CCAATGCCTA TAAAGAACGT GAAGTTCTTG AGGCTCGCGG TAAAGTGGCT
CGTTTCGAGT TGTTGTTACC TGAGTACCAA GCGGCACCTG AAGTGACCCG TAAGCGTTTG
TATCTTGATG CAATGCAGCA GGTGATGACA GATACCAATA AAGTACTGAT CGACACAAAG
AACAGTGGCA ACTTAATGTA TTTGCCCTTA GACAAGTTAA TGAAAGAGAA GCCTGTGACT
ATGCCAGAGG CTGAGAATAA GTCTCAGCAG AATGTCAATT CTTCATCTAT GTCAACGACT
CGCATCAGCG AGCCTTTGAG TGGACGTCCG TCTCGCGAGG ACCGTGCTCG CCAAGGGAGG
GAGTAA
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| Protein sequence | MAWNEPGNKG NDPWGNKGGN DKGPPDLDEV FRNLSKRFGG KGNGSSGQNF SSFSVIIILA
IAFVVWGLSG FYTIKEAERG VALRFGQHIG EVGPGLHWKA TFIDQIYPVD VQSVRSIPAS
GSMLTSDENV VKVELDVQYR ILDAYSYLFS AVDANASLRE ATDSALRYVI GHNKMDDILT
TGRDAIRRDT WKELERIIEP YKLGLAIVDV NFLPARPPEE VKDAFDDAIA AQEDEQRFIR
EAEAYAREVE PKARGEVERM AQQANAYKER EVLEARGKVA RFELLLPEYQ AAPEVTRKRL
YLDAMQQVMT DTNKVLIDTK NSGNLMYLPL DKLMKEKPVT MPEAENKSQQ NVNSSSMSTT
RISEPLSGRP SREDRARQGR E
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