Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewmr4_0599 |
Symbol | |
ID | 4251180 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. MR-4 |
Kingdom | Bacteria |
Replicon accession | NC_008321 |
Strand | + |
Start bp | 691909 |
End bp | 693216 |
Gene Length | 1308 bp |
Protein Length | 435 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 638117162 |
Product | GTP-binding protein, HSR1-related |
Protein accession | YP_732736 |
Protein GI | 113968943 |
COG category | [R] General function prediction only |
COG ID | [COG2262] GTPases |
TIGRFAM ID | [TIGR03156] GTP-binding protein HflX |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.00843062 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.00021975 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | TTGTTTGATC GTTATGAGGC GGGAGAAACA GCGGTTCTTG TCCATATCGA CTTTTCCGAT GAGGAACGCC GAGAAGACTT AGTCGAGTTA CAGCTATTAG TCGAGTCAGC TGGAGCACGC TCAGTCGGGG TCATTACTGG AAGTCGACGC TCACCAGACC GTAAGTTTTT TATTGGTTCT GGTAAAGCCG AGGAGTTAGC TGCATTAGTG GCTGCAACTG AGGCTAATGT GGTTATTTTC AATCACGCCT TGAGTCCTGC TCAAGAGCGA AACCTTGAAC AGGTGTGTCA GTGCCGAGTA TTGGACCGAA CCACGCTGAT CTTGGATATT TTTGCTCAAC GTGCTCGGAC CCATGAAGGT AAGTTACAGG TGGAGCTAGC GCAATTGCGC CACATGTCGA CGCGTCTTGT GCGTGGTTGG ACTCACCTTG AGCGCCAAAA AGGCGGTATC GGTTTACGTG GCCCGGGAGA AACCCAGCTC GAAACCGATA GACGTTTGCT CAGGGGACGC ATTAAAAATA TCAACAAACG CTTAGAGCGT GTTGATAAAC AACGTGAGCA GAGTCGTCGC GCCCGTAAGC GTAGCGACAT GCCAACAGTC TCATTAGTGG GTTATACCAA CGCGGGCAAG TCAACGCTGT TTAATGCCTT AACCTCATCT GATGTTTATG CAGCCGACCA GCTATTTGCC ACACTCGATC CCACATTGAG AAAGTTAGAT CTACCCGATG GTGCCGTGAT CTTGGCGGAC ACTGTAGGTT TTATTCGCCA TTTACCACAC GATCTAGTTG CCGCTTTTAA GGCAACATTG CAAGAAACGC GTCAAGCGGA TTTGTTGCTG CATATTGTTG ATTGTGCTGA TGAGAACATG GCGGATAACT TCGAGCAGGT ACAAAACGTG CTCGAAGATA TCGATGCTGC TGGGGTGATG CAGTTGGTTG TTTGTAATAA AATCGACCTG CTTGAGGATG TCACACCGCG CATCGAATAT GATGAACACA GTAAGCCCGT ACGTGTCTGG GTTTCGGCAC AAAAGCGTTT GGGATTTGAT CTACTCTTGA AGGCGATCAC CGAATTAATC GGTGAAGTGA TTCATGAGCT TACACTTAAG ATTCCAGCAA CTGCTGGACA TTATCTTGGC CAGTTTTATC GACTGGATGC GATACAGCAG AAAGAGTACG ACGATCTGGG GAACTGTATT TTGTCTGTTC GTTTATCGGA TGCCGATTGG CGCCGATTAG CTAAACAGAG TCAGGGTGAG TTAGAAACCT TTATCTTCGA TCCGTCGATA GAAAAGGCTG TTTGTTAA
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Protein sequence | MFDRYEAGET AVLVHIDFSD EERREDLVEL QLLVESAGAR SVGVITGSRR SPDRKFFIGS GKAEELAALV AATEANVVIF NHALSPAQER NLEQVCQCRV LDRTTLILDI FAQRARTHEG KLQVELAQLR HMSTRLVRGW THLERQKGGI GLRGPGETQL ETDRRLLRGR IKNINKRLER VDKQREQSRR ARKRSDMPTV SLVGYTNAGK STLFNALTSS DVYAADQLFA TLDPTLRKLD LPDGAVILAD TVGFIRHLPH DLVAAFKATL QETRQADLLL HIVDCADENM ADNFEQVQNV LEDIDAAGVM QLVVCNKIDL LEDVTPRIEY DEHSKPVRVW VSAQKRLGFD LLLKAITELI GEVIHELTLK IPATAGHYLG QFYRLDAIQQ KEYDDLGNCI LSVRLSDADW RRLAKQSQGE LETFIFDPSI EKAVC
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