| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr4_0598 |
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| Symbol | |
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| ID | 4251179 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008321 |
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| Strand | + |
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| Start bp | 691612 |
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| End bp | 691884 |
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| Gene Length | 273 bp |
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| Protein Length | 90 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 638117161 |
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| Product | RNA-binding protein Hfq |
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| Protein accession | YP_732735 |
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| Protein GI | 113968942 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1923] Uncharacterized host factor I protein |
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| TIGRFAM ID | [TIGR02383] RNA chaperone Hfq |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.00147514 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 6 |
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| Fosmid unclonability p-value | 0.00000962833 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGGCTAAGG GGCAATCTTT ACAAGACCCA TTTTTGAACG CACTACGCCG CGAGCGCGTT
CCTGTATCAA TTTACTTGGT AAACGGCATT AAACTCCAAG GACAGGTAGA GTCGTTTGAT
CAGTTTGTCA TTCTGTTGAA AAACACAGTG AGCCAAATGG TTTACAAACA CGCTATTTCT
ACCGTAGTAC CTGCTCGTCC ATTTAACGTT GCTGGCCATC AAAATGCCCA GGGCGGTTAT
GGTGCGCAAG ACGATATGCC AAGTGGCGAA TAA
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| Protein sequence | MAKGQSLQDP FLNALRRERV PVSIYLVNGI KLQGQVESFD QFVILLKNTV SQMVYKHAIS
TVVPARPFNV AGHQNAQGGY GAQDDMPSGE
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