Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewmr4_0593 |
Symbol | |
ID | 4251716 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. MR-4 |
Kingdom | Bacteria |
Replicon accession | NC_008321 |
Strand | + |
Start bp | 685218 |
End bp | 686717 |
Gene Length | 1500 bp |
Protein Length | 499 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 638117156 |
Product | carbohydrate kinase, YjeF related protein |
Protein accession | YP_732730 |
Protein GI | 113968937 |
COG category | [G] Carbohydrate transport and metabolism [S] Function unknown |
COG ID | [COG0062] Uncharacterized conserved protein [COG0063] Predicted sugar kinase |
TIGRFAM ID | [TIGR00196] yjeF C-terminal region, hydroxyethylthiazole kinase-related [TIGR00197] yjeF N-terminal region |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.320661 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 5 |
Fosmid unclonability p-value | 0.00000405423 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGGCACAAG ATTTATCGAG TTTACCCACG GCGCTTTATA CGCAGCAGCA GGTGAGATCC GCCGAATTGC TCGCTGTTTC AGAAGGGGAA ACCACTTTAT ATCAATTAGT TGAACGTGCT GGTCGTGCGG CATTTGAGTG TTTTACTGAG CAGCGTGAAC TCCATCCTCA GCTTGAAGGA ATGCCTTTAC TGGTATTGGC GGGCAGCGGC AATAATGGCG CCGATGCGCT AGTCTGCGCG CGCCTAGCCT TAGAAGCAGG ACATCAGGTC AAGGTGTACT TGCTTAAGAC CCAAGGCACA GCAGAATTCG AGCAGGCACT TTCTGCCTAT CTAAACCAGG GCGGTGTTAT CGATTCCCCA AATATCGAAG CGATACAGCA GGCGCCAGTC ATTATCGATG GTCTACTGGG CACTGGAGTT AAGGGCGCAG TGCGTGAGGA TATTGCTGCA CTGATCCATG CGGTCAATCA GAGCGAGGCT TGGGTGCTGA GTTTAGATCT GCCCTCGGGG ATCGTTGCCG ATACTGGCGT TGTGGCTCAA GCCGCGGTGA TGGCGGATGT CACTCTGTGC TTTGGTGGGT TAAAACAGGG GCTTTTGACC AGCAAGGCGA GACATCACTG TGGCCATTTA ACCTTTGCCG ATCTGGGATT AACGCCTTTC TTCGATACTG AGAGTGCAAC GCGAGTCGGC GGTGAAATGT TAAAAAGCCA TTTTGCCGCA AGAGCACGGG ACAGCCACAA GGGGCAATCG GGCAAAGTAA CGCTGATCGG TGGTGACTTT GGTATGGCAG GAGCCATTCG CCTCGCCAGT GAGGCCTGTT TACGTGCGGG CGCCGGATTG GTGACTGTGA TCAGTCGCCC TGAGCATCAA CTCACTGTCA ACGTCTCACG ACCCGAATTG ATGTTTTGGG GCTGTGAACT GGTTGATATG GAAGTCTATC TGCGCCTAGG TTGGGCACAG GTGGTGGTAC TTGGCCCAGG TTTAGGAAAA CACGACTGGG GTTATAACTT GTTTAAAGCC GCGGGCTTAA GCGATAAACC CTGTGTGCTC GATGCCGATG CCCTGAATCT GCTCAGTCAA GAACCGCGCA GGCAAACTAA CTGGGTACTC ACGCCTCATC CCGGGGAAGC CGCGCGGCTC TTGGGATGCA GTGTCGCCGA CATTGAGCAG GATAGATTTG CTGCCGTGCG TGCTCTGCAG CAAAAATATG GTGGCGTGGT GCTGCTCAAA GGCGCGGGTA CAGTCATTTT TGATGGAAAA CAGATGGTCG TGGCACCTGT TGGTAATCCT GGGCTTGCGA GTGGTGGGTG CGGCGATGTG TTATCTGGTA TTATAGGCGC ACTTATGGCT CAAGGAATGG ATAACATGCA GGCGACCGTT GTTGGGGTTG TCGTTCATGG CTGCGCGGCG GATTTGGCTG CAGTGCAGGG TGAGCGGGGC ATGTTAGCCA GCGATTTGAT GCCTTTTATT CGCCAATTAG TAAATAGTGA TTTACTCTAG
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Protein sequence | MAQDLSSLPT ALYTQQQVRS AELLAVSEGE TTLYQLVERA GRAAFECFTE QRELHPQLEG MPLLVLAGSG NNGADALVCA RLALEAGHQV KVYLLKTQGT AEFEQALSAY LNQGGVIDSP NIEAIQQAPV IIDGLLGTGV KGAVREDIAA LIHAVNQSEA WVLSLDLPSG IVADTGVVAQ AAVMADVTLC FGGLKQGLLT SKARHHCGHL TFADLGLTPF FDTESATRVG GEMLKSHFAA RARDSHKGQS GKVTLIGGDF GMAGAIRLAS EACLRAGAGL VTVISRPEHQ LTVNVSRPEL MFWGCELVDM EVYLRLGWAQ VVVLGPGLGK HDWGYNLFKA AGLSDKPCVL DADALNLLSQ EPRRQTNWVL TPHPGEAARL LGCSVADIEQ DRFAAVRALQ QKYGGVVLLK GAGTVIFDGK QMVVAPVGNP GLASGGCGDV LSGIIGALMA QGMDNMQATV VGVVVHGCAA DLAAVQGERG MLASDLMPFI RQLVNSDLL
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