Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewmr4_0588 |
Symbol | |
ID | 4251711 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. MR-4 |
Kingdom | Bacteria |
Replicon accession | NC_008321 |
Strand | - |
Start bp | 679761 |
End bp | 680645 |
Gene Length | 885 bp |
Protein Length | 294 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 638117147 |
Product | hypothetical protein |
Protein accession | YP_732725 |
Protein GI | 113968932 |
COG category | [R] General function prediction only |
COG ID | [COG5006] Predicted permease, DMT superfamily |
TIGRFAM ID | [TIGR00688] rarD protein |
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Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 0.0107806 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGAGCCAGA CCTCTAAATC TTCGGGATTA ATCGAATTAC ACTTAGCTGT GCTGATGTTT GGCGGCACAG CTTTGTTTTC AAAGTTAATT CCCTTAAGCG CACTCGATAT CACCTTCTTA CGCTGTGTGG TCGCGGCGTT AGTCTTGACG TTACTCATCA AGTTCCGCGG TAAATACTTA AGCCTTGCCA GCAAACAGGA TTATCTGGTT GCTATTGGCT TAGGCGTGAT AGTCAGCTTA CACTGGGTCA CCTACTTTGC CGCGATGCAA CTCTCATCGG TCGCCATCGG CATGATTGCC TTCTTCACCT ATCCGGTGAT GACAGTCATT GCCGAACCGT TATTAACGGG CAATAAAATC AAGCTGATGG ATATTATCAG CGGTGTTTTA GTGCTGATAG GCGTAGTGCT ATTGATCCCC GAAGCCAATC TTGGCAACGA TACAACCTTA GGGATTGCGG TCGGGATTGT CTCGGCGATG TTATTTACCG CCCGTAACCT GCTGCAAAAA CGCTATTTTT CCCAATATAG CGGCCCCCAT GCCATGTTTT ATCAGACCTT AGTGGCGGCG GTGTTTCTTA TGCCTTGGCA TCAAACCGAG TTGCAGACTA TCTCCCTCGG GACCTGGGGC TTGATTGTGC TGCTCGGGGT GGTATTTACC GCCGCGCCCC ATGCACTCTT CACCTCGGCA TTGCGCCAAT TAAGCGCTAA AACCGTCGGG TTAGTCTCCT GCCTACAGCC CTTCTACGGA GCCATGTTGG CATTAGTGAT CTTAGGCGAA GCACTGAATC TCAATACCCT GATAGGCGGA ACCATCATAG TCGCCACCGC CATCTTCGAA ACCCATCAAT CCCACCAGTC ACAACGGCGA AAAAAGAACG TCTGA
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Protein sequence | MSQTSKSSGL IELHLAVLMF GGTALFSKLI PLSALDITFL RCVVAALVLT LLIKFRGKYL SLASKQDYLV AIGLGVIVSL HWVTYFAAMQ LSSVAIGMIA FFTYPVMTVI AEPLLTGNKI KLMDIISGVL VLIGVVLLIP EANLGNDTTL GIAVGIVSAM LFTARNLLQK RYFSQYSGPH AMFYQTLVAA VFLMPWHQTE LQTISLGTWG LIVLLGVVFT AAPHALFTSA LRQLSAKTVG LVSCLQPFYG AMLALVILGE ALNLNTLIGG TIIVATAIFE THQSHQSQRR KKNV
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