Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewmr4_0586 |
Symbol | |
ID | 4251709 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. MR-4 |
Kingdom | Bacteria |
Replicon accession | NC_008321 |
Strand | - |
Start bp | 675751 |
End bp | 676473 |
Gene Length | 723 bp |
Protein Length | 240 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 638117145 |
Product | glycerophosphoryl diester phosphodiesterase |
Protein accession | YP_732723 |
Protein GI | 113968930 |
COG category | [C] Energy production and conversion |
COG ID | [COG0584] Glycerophosphoryl diester phosphodiesterase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 31 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 0.0869814 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCTTATTT TTGCTCACCG TGGTGCCAGC GGTTATGTGG CGGAAAACAC CTTAGCCGCC ATGGCCAAAG CCATAGAGTT AGGTGCCACA GCCATTGAGC TGGATGTGCA TAATGTCGAA GGGGAGTTAA TGGTATTTCA CGACCGCAGA CTCGACAGTA AAAGCTCGGG CCAAGGTATC ATCCATTTAG TCAACAAAGA GTATTTGGGC AAGGTCACTG TCAAAGGTGA GCCGATTCCC ACACTCTGGC AAGTGCTCGA ACTGGTTGCT GGCCGTGCCA CAATCAACAT CGAACTTAAA GGGGTGAATA CGGTAGCGCC GCTACTCGAG CTTTATCCTA AAGCGATTGC CGAGCTGGGG TTCAGCACTG AGCAATTGCT GATCTCATCC TTCAATCATC CCTATTTACA GCAAGTCAAA CAGGCGTTGC CACAGGCATT AGTGGCGCCC TTGCTTGCCA GTATTCCCCT CAATGGTGCG GCGGTGGTGA GCGAGTTAGC CGCCTATTCC CTGCATTTAG ACGTGAGTTT TATCAGCAAG GCCCTAGTGG ATGACGCTCA CCAGAGGGGC GCTAAGGTGT ATGTTTACAC TGTCGATCAT AGTGATGATA TCCATGCCCT TAAGCAGTTA GGGGTCGATG GTATCTTTAG CAATTACCCC GACCGTGCCA TGCAGGCGCT GTTACAACCC ACCAATACGG ATTATTGCGG CTACTTCGAA TAA
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Protein sequence | MLIFAHRGAS GYVAENTLAA MAKAIELGAT AIELDVHNVE GELMVFHDRR LDSKSSGQGI IHLVNKEYLG KVTVKGEPIP TLWQVLELVA GRATINIELK GVNTVAPLLE LYPKAIAELG FSTEQLLISS FNHPYLQQVK QALPQALVAP LLASIPLNGA AVVSELAAYS LHLDVSFISK ALVDDAHQRG AKVYVYTVDH SDDIHALKQL GVDGIFSNYP DRAMQALLQP TNTDYCGYFE
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