Gene Shewmr4_0576 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr4_0576 
Symbol 
ID4251139 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-4 
KingdomBacteria 
Replicon accessionNC_008321 
Strand
Start bp661056 
End bp662450 
Gene Length1395 bp 
Protein Length464 aa 
Translation table11 
GC content49% 
IMG OID638117135 
ProductPhoH family protein 
Protein accessionYP_732713 
Protein GI113968920 
COG category[T] Signal transduction mechanisms 
COG ID[COG1875] Predicted ATPase related to phosphate starvation-inducible protein PhoH 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones38 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAACAAG ACGACAGAAA GTTGTTTGTA CTGGATACCA ATGTGTTACT ACATGAACCT 
TTGGCGATCT ATTCGTTTAA AGAGCACGAT GTGGTCATTC CGATGACAGT GCTAGAAGAG
CTAGACCAGA TTAAAGATCG AAAGAGTGAT GTGAGTCGGG ATGCTAGGGT CGCCATACGG
GCGCTGGAAG ATACCCTAGG CGGTGATACA ACACCGGAAC AAATCATTAA TGGTGTCCCT
TTACCGAGCC GAGAAGGGCA TGCCGATGCG ATAGGGGCGC TGTCTATTTT CCCTGACCAT
CTTGTCGATT TTACCCTAGG CGCCCTGCCG GGGGATGGCA ACGATAACCG CATTATCAAT
ACCGCTCTAC ACCTGCAAAA CCTCCACCAT CCACGTACCG TGGTGTTAGT TACCAAAGAT
ATCAATATGC GTCTTAAGGC CAAGGGCGCG GGCATTCAAT TGGTTGAGGA TTATCGAACC
GACCAGCTGA TCGATGATAT TCGTTTCCTT AGCAAGGGCT TTTATCAATT CGAAGGGAAT
TTTTGGGAGC ATTTAAACAA GGTATCCACC GAGCGCCATG GTCGACATAC GATTCACGAA
GTCCCACTGA AAGATTTAGA TAACGAACCC TTCTACATAA ACCAGTATCT GATTGATGCC
GAATCTGATT TTTGTGGCCG CGTCACCGAG CGTAGCGATA CCCATCTGCA TATTTTAGAC
CTGGGCCGCG AGCGCTTAAA AAACCTCGAG GCGTGGGGCG TTAAACCTAA GAATGTTTAC
CAAGGGATGG CGTTGCAGGC GCTGCTCGAT CCCGATATCG ATCTGGTGAT CTTAACGGGA
CCCGCCGGTT GCGGTAAAAC CCTGCTGGCA ATGGCGGCGG CACTTGAGCT AGTAGTGGAG
CGTAATCGCT ACGATAAGGT CATTGTGACT CGTAATACGC CAGAAATTGC CGAGTCCATC
GGCTTCTTAC CCGGCACCGA AGAAGAGAAG ATGATGCCAT GGCTGGCGGC GATTACCGAT
ACCTTAGAAG TGCTGCATAA GAATGATGTG AATCCGACTG GCAGTTTGAA CTACATCATG
GAGAAGGCGA ATATCCAATT TAAGTCGATC AACTTTATGC GCGGCCGCTC GATCCAAAAC
TCCATCGTGC TCTTGGATGA ATGTCAAAAC CTGACGGCGT CGCAGATCAA AACCATGATC
ACTCGGATGG GAGAAGGCAC AAAATTGATT TGTTGCGGTA ACTTAGCGCA GATCGATTCG
AATTATCTCA CCGCAGTGAC CTCGGGTTTA ACCTACATAG TCGAACGCTT TAAGGACTTT
GAAGGCAGCG CCAACCTGTA CTTGAATGGG GTGGTACGTT CACGCTTGGC CGAATACGCC
GAAGAACATC TCTAA
 
Protein sequence
MEQDDRKLFV LDTNVLLHEP LAIYSFKEHD VVIPMTVLEE LDQIKDRKSD VSRDARVAIR 
ALEDTLGGDT TPEQIINGVP LPSREGHADA IGALSIFPDH LVDFTLGALP GDGNDNRIIN
TALHLQNLHH PRTVVLVTKD INMRLKAKGA GIQLVEDYRT DQLIDDIRFL SKGFYQFEGN
FWEHLNKVST ERHGRHTIHE VPLKDLDNEP FYINQYLIDA ESDFCGRVTE RSDTHLHILD
LGRERLKNLE AWGVKPKNVY QGMALQALLD PDIDLVILTG PAGCGKTLLA MAAALELVVE
RNRYDKVIVT RNTPEIAESI GFLPGTEEEK MMPWLAAITD TLEVLHKNDV NPTGSLNYIM
EKANIQFKSI NFMRGRSIQN SIVLLDECQN LTASQIKTMI TRMGEGTKLI CCGNLAQIDS
NYLTAVTSGL TYIVERFKDF EGSANLYLNG VVRSRLAEYA EEHL