| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr4_0536 |
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| Symbol | |
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| ID | 4250890 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008321 |
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| Strand | + |
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| Start bp | 619186 |
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| End bp | 620199 |
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| Gene Length | 1014 bp |
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| Protein Length | 337 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 638117095 |
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| Product | glyceraldehyde-3-phosphate dehydrogenase |
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| Protein accession | YP_732673 |
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| Protein GI | 113968880 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0057] Glyceraldehyde-3-phosphate dehydrogenase/erythrose-4-phosphate dehydrogenase |
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| TIGRFAM ID | [TIGR01534] glyceraldehyde-3-phosphate dehydrogenase, type I |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 40 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCAATCA AAATTGGCAT TAATGGTTTC GGGCGTATGG GGCGTTTAGC CCTGCGTGCG
GCGTGGGAAT GGGATGATGT TGAGTTTGTG CAGATTAATG ATCCTGCTGG GGATGCGGCT
ACCTTGGCCC ATTTGCTTGA GTTCGATTCA GTCCATGGTC GCTGGCGTTA TCCGGTAACG
GCGAGTCACG ATGGCATTCA AATTCAAGAT AAAACCATTC ACACTACAGG CAATAAAACG
ATTGCTGAGA CCGATTGGTC GGGATGCGAT GTGGTGATTG AAGCCTCCGG CGTGATGAAA
ACCAAAGCCT TGCTACAAGC CTATTTAGAT CAAGGCGTTA AGCGGGTGGT TGTGACCGCA
CCTGTGAAAG AAGAGGGGGT GTTAAATGTG GTGATGGGCG TGAACCATCA GCTATACGAT
CCTACTATCC ACCCAATCGT CACTGCCGCA TCTTGTACTA CCAACTGCCT TGCGCCTGTG
GTGAAAGTGA TCCATGAGCA GATCGGCATT AGGCATGGTT CCATGACGAC CATCCACGAT
ATTACCAATA CCCAGACGAT TCTCGATGCG CCCCATAAGG ATTTACGCCG TGCCCGCGCC
TGTGGTTTGA GTTTAATCCC CACCACCACC GGCAGTGCGA CGGCAATTAC CCATATTTTC
CCAGAGCTTA AGGGCAAGTT GAATGGCCAT GCCGTACGGG TGCCGCTCGC TAATGCGTCC
CTTACCGACT GTGTATTTGA GCTTGAGCGC AGAGTGACTG AAGCAGAAGT GAATGCGTTG
CTACAAAGCG CCGCCGAAGG TGAGCTTAAG GGTATTTTAG GTTATGAGGA GCGGCCGTTA
GTGTCGGTTG ATTATAAAAC CGATCCCCGT TCGAGCATTG TCGATGCGCT TTCGACCATG
GTGGTGAATG GGACTCAGCT AAAACTCTAC GTGTGGTACG ACAATGAGTG GGGATATGCC
AACCGTACGG CAGAGCTCGC CCGTTTAGTC GGCCAGCTTG ATATGCCGCG TTAG
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| Protein sequence | MAIKIGINGF GRMGRLALRA AWEWDDVEFV QINDPAGDAA TLAHLLEFDS VHGRWRYPVT
ASHDGIQIQD KTIHTTGNKT IAETDWSGCD VVIEASGVMK TKALLQAYLD QGVKRVVVTA
PVKEEGVLNV VMGVNHQLYD PTIHPIVTAA SCTTNCLAPV VKVIHEQIGI RHGSMTTIHD
ITNTQTILDA PHKDLRRARA CGLSLIPTTT GSATAITHIF PELKGKLNGH AVRVPLANAS
LTDCVFELER RVTEAEVNAL LQSAAEGELK GILGYEERPL VSVDYKTDPR SSIVDALSTM
VVNGTQLKLY VWYDNEWGYA NRTAELARLV GQLDMPR
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