Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewmr4_0500 |
Symbol | |
ID | 4251746 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. MR-4 |
Kingdom | Bacteria |
Replicon accession | NC_008321 |
Strand | - |
Start bp | 573209 |
End bp | 575602 |
Gene Length | 2394 bp |
Protein Length | 797 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 638117059 |
Product | fatty acid cistrans isomerase |
Protein accession | YP_732637 |
Protein GI | 113968844 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 33 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 41 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAATCCGA TAAACGCAAT CTGGAAACGT TGGCTCTTAG CCATAGTATT AGCGGCCTCG GGTTGTGCTA GCGTTGCCCA GGTGGATTTC GACAGTCTTT ATGGTAAAAG CTCGCCGCAG ACGCGGGCCG ACAATCGGCC AATCCAGAGT GAACTCACTT CACAAACAAA GGCTTATCAC TCGACTGTTG AACCTATCAT CAACAGTCGC TGCGTGGTTT GCCATGCCTG TTACGATGCG CCCTGCCAGC TTAAAATGAC TTCCAGTGAG GGCATTGAAC GGGGCGCGAA CAATGAAAAA GTCTATCAGG GCACCCGTTT GATGGCGGCA ACGCCGAATC GGTTATTTGT CGATGCCCAC ACACCTGAAG CATGGCGCGA ACGCGGGTTT TATCCCGTGC TCAATGAGCG CGCCCAGACC CCGCTGGCCA ATACCCAGGC CTCAGTGCTG GCGCGGATGT TAACGCTAAA ACAGGCCCAT CCCCTGCCGG ACACTAAACA CCTCGATAAA AGCTTCGACT TTAGCCTCGA TCGGGTTCAG CAATGCGCCA GCATTGAGGA AATGGACAAA TACGAACAAT ACCAACCGCT TGCGGGTATG CCCTACGGCT TACCTGCGCT CAATCAGCAG GAACATAAGG TATTGATGCA ATGGCTCGAA CAGGGCGCAG TGTTGTCGAC GCCACCCGCG CTTAGCGCCG AGTTCAATCA AGAAATCGCT CGTTGGGAGC AGTTCTTAAA TGCCGACAGC CTCAAGGCGC AACTGAGCGC CCGTTATATT TACGAGCACT TATTTGCCTT CCACCTGTAT TTTGAGTCAT TAACCGCGGC CGATGCTCCT GCGGCTTACT TCGAGTTAGT GCGCTCACGC ACACCGCCGG GCAAACCGAT TGATCTGATT GCCAGCCGCC GTCCCTTCGA CGATCCGCAA GTGTCGCGGG TGTATTACCG CTTTCAGCCC TATCACGCCA CGATCGTCGA TAAGACCCAT ATTCCCTACG CCTTGAATAA CACTGTGCTG CAAAACTGGC AGCAGTGGTT TATCGACGCC CAATACCAAG TCAGCTCGCT GCCCAGCTAT GCGCCGAGCG TATCGGCCAA CCCTTTCGAG GCCTTTATTC AACTGCCCGC AGGCTCGCGC TATCGCTTTA TGCTTACCCG CGCCCAAGAC ACTATTATGG GCTTTATCAA GGGGCCGGTT TGCCGTGGTC AGGTCGCCCT CAATGTGATC AACGATAGAT TTTGGGTTTA CTTTGTCACC CCAGAATATA TGGACGATAG CGACTTTACC GACTTCTACC ACGGCCAAAT CGAGAACCTA CGCATGCCTG CTGAGGAAGA AAGCACCGCC CTTGCCGTGA CCTGGGTGAA ATATGCCGCC AAACAGGGCG AGTATATGCG GGCACGAAAT CAGTTTTTAA ATCATAAGTT TAAAAATGGT CGCCACCTCA CTATCGACGG CCTATGGGAT GGCGACGGCA ACAATGATAA TGCCAGCCTG ACGGTATTTA GGCATTTCGA TAATGCCACT GTGGTGAAAG GGTTAGTGGG AGAATCCCCT AAGACGGCTT GGGTGATCGA CTATGCCCTG CTAGAGCGTA TTCACTACCT TTTGGTCGCG GGTTTCGATG TGTATGGCAA CTATGGCCAC CAGCTACTCA CCCGCCTGTA TATGGATTTT TTACGGATGG AGGGCGAGTC TAACTTCTTG ACCTTATTAC CCCAAGAGGA GCGCCGTAAG CAGTTTAAGG ATTGGTATCA GGATGCGGGC ACCCAGTTGA CCGCCTTTAT CGCGGGGGAT ATTAATACCT TCAATCAGCC CACGGGCGTG CTCTACTACA CGGACGATCT AAAAGCCGAA CTCTACCAAA AGTTGGCCGC TAAGGTCGGC GAGGTTCAGC CCCAACGCTA TCAAATCGCA CTCAGTCAGT TGCAACCTAA CAGCAAGGCA TTGTTGCAGG CGCTAGGCAG AGTCAAAGGC ACGCAAGCGA CCCTTTTGCC CGAGCTGACG ATGATCATGA TTGAGCCTGA AAAAACGGGC AAAGCGGAAA TCTTTACCTT AGTACGTAAC AGTGCCCATC GAAATATTTC GAGCCTATTC AGTGAGGAAA GCAACCGCGA TCCCGCCAAG GATGATGTCA CGCTAGTGCG CGGGCTATTG GGTAGTTATC CCGAAGCCTT CTGGCATATT AAGGAGCAAG ACTTAGCCAA AGTTGTGGCT AAAGTCGAAG GCATGCAAAC CGAAAAAGAC TACGAGGCGT TATTGGATTT GGCGGCAGTG CGCCGCACCG ATCCGCGTTT CTGGGCCTTT AGTGACAAAC TTAACCAAGC CTTTTTCGAC AGTCACCCGA TTGAGAGCGG TTGGCTGGAC TACAATCGGC TGCAAAATCG CTAA
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Protein sequence | MNPINAIWKR WLLAIVLAAS GCASVAQVDF DSLYGKSSPQ TRADNRPIQS ELTSQTKAYH STVEPIINSR CVVCHACYDA PCQLKMTSSE GIERGANNEK VYQGTRLMAA TPNRLFVDAH TPEAWRERGF YPVLNERAQT PLANTQASVL ARMLTLKQAH PLPDTKHLDK SFDFSLDRVQ QCASIEEMDK YEQYQPLAGM PYGLPALNQQ EHKVLMQWLE QGAVLSTPPA LSAEFNQEIA RWEQFLNADS LKAQLSARYI YEHLFAFHLY FESLTAADAP AAYFELVRSR TPPGKPIDLI ASRRPFDDPQ VSRVYYRFQP YHATIVDKTH IPYALNNTVL QNWQQWFIDA QYQVSSLPSY APSVSANPFE AFIQLPAGSR YRFMLTRAQD TIMGFIKGPV CRGQVALNVI NDRFWVYFVT PEYMDDSDFT DFYHGQIENL RMPAEEESTA LAVTWVKYAA KQGEYMRARN QFLNHKFKNG RHLTIDGLWD GDGNNDNASL TVFRHFDNAT VVKGLVGESP KTAWVIDYAL LERIHYLLVA GFDVYGNYGH QLLTRLYMDF LRMEGESNFL TLLPQEERRK QFKDWYQDAG TQLTAFIAGD INTFNQPTGV LYYTDDLKAE LYQKLAAKVG EVQPQRYQIA LSQLQPNSKA LLQALGRVKG TQATLLPELT MIMIEPEKTG KAEIFTLVRN SAHRNISSLF SEESNRDPAK DDVTLVRGLL GSYPEAFWHI KEQDLAKVVA KVEGMQTEKD YEALLDLAAV RRTDPRFWAF SDKLNQAFFD SHPIESGWLD YNRLQNR
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