| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr4_0481 |
|---|
| Symbol | |
|---|
| ID | 4250905 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella sp. MR-4 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008321 |
|---|
| Strand | - |
|---|
| Start bp | 546640 |
|---|
| End bp | 547686 |
|---|
| Gene Length | 1047 bp |
|---|
| Protein Length | 348 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 51% |
|---|
| IMG OID | 638117040 |
|---|
| Product | response regulator receiver modulated metal dependent phosphohydrolase |
|---|
| Protein accession | YP_732618 |
|---|
| Protein GI | 113968825 |
|---|
| COG category | [K] Transcription
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG3437] Response regulator containing a CheY-like receiver domain and an HD-GYP domain |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 31 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 33 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACTCCAT TCGTAACAAA ACCTACCCTT TTGGTAGTGG ATGACACTCC AGACAATATT
CAGATCATTC ATGGGATCTT GTCAGAGCAA TACACTATCC GCGCCGCGAC ATCGGGTGAA
AAAGCGTTAA AACTGGCCAG CACCCATCCA TTACCAGAGT TAATCCTACT CGATGTGATG
ATGCCTGAGA TGGACGGCTT CGAAACCTGT CGCAGACTCA AACGCGATCC TGTTACCAGC
AAGATCCCCG TAGTGTTTGT CACCGCTAAG ACAGACACCA TAGACGAGCA AACCGGATTT
GAACTCGGCG CGGTGGACTA TATTTCCAAA CCCATTAGCC CTGCGGTACT GAAGGTACGT
ACTCAAACCC ATTTAGCCTT GAGCAATCAG GCAAGGCAGC TCGAAGCACT GGTTCAGCAA
CGAACCCAAG AGCTTGAATC GACTCGTCAT AAGATTATTC AAAAGCTTGG ACTGGCGGCA
GAATATCGGG ATAACGAGAC GGGATTACAT ATCTCCCGCA TGAGCCATTA TGGCCGTATT
CTGGCCCAAC AGGTTTGCGA TTCGCAGGCT TGGTGTGAGA TGTGTTTTAC TGCGCTGCCG
ATGCACGACA TTGGCAAAAT TGGCATCCCA GATTCGATTC TGTCAAAACC GGGTAAGTTA
ACCGATGACG AGTGGCAGCA AATGCAGCAA CATGCCAGCT TCGGCGCACA GATCCTCGGT
GACGATGACG ATCCGCTGTT ATCCCTCGCC AAGGAAATCG CCCTCCATCA CCATGAACGT
TGGGACGGGA CAGGCTACCC CCATGGGCTG GCTGGCGAGC AAATCCCATT AAGCGCCCGC
ATTGCCGCCA TTGCCGATGT TTTCGATGCA CTCACATCAG ACCGCCCCTA TAAACTCGCG
TGGAGTACGG AGCAGGCCTT TAATTACATT GAAGAAAACT CAGGGACTCA GTTTGACCCA
AAGCTTGCCT TTGCCTTTAT CGCCTGCAAA GAGCAAATAC TGCAAATACA ACAACGTTTT
GCCGAGCCGA TAGCCACAGC CCCTTGA
|
|---|
| Protein sequence | MTPFVTKPTL LVVDDTPDNI QIIHGILSEQ YTIRAATSGE KALKLASTHP LPELILLDVM
MPEMDGFETC RRLKRDPVTS KIPVVFVTAK TDTIDEQTGF ELGAVDYISK PISPAVLKVR
TQTHLALSNQ ARQLEALVQQ RTQELESTRH KIIQKLGLAA EYRDNETGLH ISRMSHYGRI
LAQQVCDSQA WCEMCFTALP MHDIGKIGIP DSILSKPGKL TDDEWQQMQQ HASFGAQILG
DDDDPLLSLA KEIALHHHER WDGTGYPHGL AGEQIPLSAR IAAIADVFDA LTSDRPYKLA
WSTEQAFNYI EENSGTQFDP KLAFAFIACK EQILQIQQRF AEPIATAP
|
|---|
| |