| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr4_0476 |
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| Symbol | |
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| ID | 4250900 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008321 |
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| Strand | + |
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| Start bp | 541423 |
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| End bp | 542484 |
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| Gene Length | 1062 bp |
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| Protein Length | 353 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 638117035 |
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| Product | 2-nitropropane dioxygenase, NPD |
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| Protein accession | YP_732613 |
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| Protein GI | 113968820 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG2070] Dioxygenases related to 2-nitropropane dioxygenase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 31 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 33 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCGTGCC GACTAACACA ATTGTTTGGG ATCCAGTTTC CGATTATTCA AGCCCCGATG
GCGGGCGTGC AGGGTAGTGC ACTGGCGATT GAAGTATCGC AGGCAGGTGG ATTGGGCTCC
TTGCCCTGCG CCATGTTATC CCTCGAGGCG CTTGAGGCTG AGTTAACCGA AATCCGCAGC
AATACCACTA AACCTATCAA TGTAAATTTC TTTTGCCATA GTGAGCCTTT AGCGCAGGCG
GCCAAGCAAG CGGCTTGGCT TGAACAGCTC TCGCCTTATT TTACTGAATT TAATTTCGAT
CCGAATGCGC AGCCCGCTGG CGCCCAGCGC ACCCCCTACA GCAAGGCGCA GGCCGAGGTG
TTAGCCAAAT TTAAGCCCGA GGTGGTGAGT TTTCATTTTG GGCTGCCCGA TGAAGAATTG
CTGCTGGAAA TCAAATCCTG GGGCTCAAAA GTTATCTCCA CGGCGACTAC AGTCGAGGAG
GCTCTTTGGC TCGAGGCCCG TGGCGCCGAT GCGATTATTG CCCAAGGTCT AGAGGCGGGC
GGGCACAGAG GGCACTTTTT ATCCGAGGAT TTAACCGAGC AGCAGGGGAC TTTTAGTCTA
TTACCGCAGG TGATTGCGGC AGTGGATATT CCGGTGATTG CCGCCGGCGG CATTGTCGAT
GCCACTACAG TGCGCGCCGC CATGGCGATG GGCGCTTCGG CGGTGCAAGT GGGAACAGCC
TATTTACTCT GCCCCGAGTG CAATACCAGC AGCATCCATC GTGAGGCGCT GCAAAGCGAC
GCCGCGCAGC ATACGGCACT GACTAATTTA TTTTCCGGTC GACCCGCTCG CGGCATAGTG
AACCGCTTTA TGGCCGAGAT GGGGCCGATG AATGAAGCTG TGCCAGATTT CCCCTTGGCA
TCCTCGGCCG TTGCAGGCTT AAGAACGGCG GCGGAGCAAC AAGGATTTGG CGATTTTAGT
CCGCTATGGT GCGGCCAAAA TGCCAGTGGT TGCCGAAACA TTCCCGCAGC CGAGCTGACG
AGGCAGTTGG CTTTAGGTGT GATGGGAGCA TTATCTGGCT GA
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| Protein sequence | MPCRLTQLFG IQFPIIQAPM AGVQGSALAI EVSQAGGLGS LPCAMLSLEA LEAELTEIRS
NTTKPINVNF FCHSEPLAQA AKQAAWLEQL SPYFTEFNFD PNAQPAGAQR TPYSKAQAEV
LAKFKPEVVS FHFGLPDEEL LLEIKSWGSK VISTATTVEE ALWLEARGAD AIIAQGLEAG
GHRGHFLSED LTEQQGTFSL LPQVIAAVDI PVIAAGGIVD ATTVRAAMAM GASAVQVGTA
YLLCPECNTS SIHREALQSD AAQHTALTNL FSGRPARGIV NRFMAEMGPM NEAVPDFPLA
SSAVAGLRTA AEQQGFGDFS PLWCGQNASG CRNIPAAELT RQLALGVMGA LSG
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