| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr4_0430 |
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| Symbol | |
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| ID | 4251904 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008321 |
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| Strand | + |
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| Start bp | 480269 |
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| End bp | 481696 |
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| Gene Length | 1428 bp |
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| Protein Length | 475 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 638116989 |
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| Product | dihydrolipoamide dehydrogenase |
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| Protein accession | YP_732567 |
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| Protein GI | 113968774 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1249] Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component, and related enzymes |
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| TIGRFAM ID | [TIGR01350] dihydrolipoamide dehydrogenase |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.0000011549 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 39 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGTAACG AAATCAAAAC TCAGGTAGTG GTATTAGGTG CAGGTCCTGC GGGATATTCT
GCTGCCTTCC GTGCGGCTGA CTTAGGTCTG GAAACCGTTA TCGTTGAACG TTTTAGCACT
TTAGGTGGCG TGTGTCTGAA CGTGGGTTGT ATCCCATCTA AAGCCCTGCT ACACGTTGCT
AAAGTGATCG AAGAAGCCAA AGCCGTTGCT GCACACGGTG TTGTGTTCGG CGAGCCAACA
ATCGACTTAG ACAAGTTACG CAGCTTCAAG CAAAAAGTGA TCAGCCAGTT GACTGGTGGC
TTAGGCGGCA TGTCTAAAAT GCGTAAAGTA AACGTTGTTA ATGGCTTCGG TAAATTTACT
GGCCCTAACA GCTTAGAAGT GACTGCGCAG GACGGCACTG TGACTGTTGT TAAGTTTGAC
CAAGCGATCA TCGCTGCGGG TTCTCGCCCA ATCAAACTGC CATTCATTCC CCATGAAGAC
CCACGTATTT GGGATTCGAC CGACGCATTA GAACTGAAAG AAGTTCCTGG CAAACTGCTG
GTAATGGGCG GCGGTATCAT CGGTTTAGAA ATGGGTACTG TTTACTCTTC TCTGGGCAGT
GAAATCGATG TGGTTGAAAT GTTCGACCAA GTGATCCCAG CGGCTGACAA AGACGTCGTT
CGCGTATTCA CTAAGCAAAT CAAGAAGAAA TTCAACCTGA TCCTCGAAAC TAAAGTGACT
GCGGTTGAAG CCCGTGAAGA CGGTATCTAT GTTTCGATGG AAGGTAAGAG CGCGCCAGCA
GAGCCAGTAC GTTACGATGC AGTGTTAGTG GCAATCGGTC GTACCCCTAA TGGCAAGCTG
ATCGACGCTG AAAAAGCGGG CGTTAAGATC GATGAGCGTG GTTTCATCAA CGTAGACAAG
CAATTACGTA CTAACGTACC GCACATCTAC GCTATCGGTG ACATCGTTGG TCAACCAATG
TTGGCTCACA AAGGCGTGCA CGAAGGCCAC GTAGCGGCCG AAGTGATCGC GGGTATGAAG
CACTACTTCG ATCCAAAAGT TATCCCATCA ATCGCTTACA CAGACCCTGA AGTGGCCTGG
GTTGGTCTGA CTGAGAAAGA AGCTAAAGAG CAAGGTATTG CTTACGAAAC AGCGACTTTC
CCATGGGCAG CCTCTGGCCG TGCAATCGCT TCAGATTGCA GCGAAGGTAT GACTAAGCTG
ATTTTCGATA AAGACACTCA CCGCGTTATC GGTGGTGCTA TCGTGGGTGT GAACGGCGGA
GAACTGTTAG GCGAAATCGG TCTGGCAATC GAAATGGGTT GTGATGCTGA AGATTTAGCA
TTAACCATCC ACGCTCACCC AACTCTGCAC GAGTCAGTGG GTCTAGCGGC TGAAATCTAC
GAAGGTTCTA TTACTGATCT GCCAAACCCA AAGGCAAAGA AAAAGTAA
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| Protein sequence | MSNEIKTQVV VLGAGPAGYS AAFRAADLGL ETVIVERFST LGGVCLNVGC IPSKALLHVA
KVIEEAKAVA AHGVVFGEPT IDLDKLRSFK QKVISQLTGG LGGMSKMRKV NVVNGFGKFT
GPNSLEVTAQ DGTVTVVKFD QAIIAAGSRP IKLPFIPHED PRIWDSTDAL ELKEVPGKLL
VMGGGIIGLE MGTVYSSLGS EIDVVEMFDQ VIPAADKDVV RVFTKQIKKK FNLILETKVT
AVEAREDGIY VSMEGKSAPA EPVRYDAVLV AIGRTPNGKL IDAEKAGVKI DERGFINVDK
QLRTNVPHIY AIGDIVGQPM LAHKGVHEGH VAAEVIAGMK HYFDPKVIPS IAYTDPEVAW
VGLTEKEAKE QGIAYETATF PWAASGRAIA SDCSEGMTKL IFDKDTHRVI GGAIVGVNGG
ELLGEIGLAI EMGCDAEDLA LTIHAHPTLH ESVGLAAEIY EGSITDLPNP KAKKK
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