Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewmr4_0425 |
Symbol | |
ID | 4251899 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. MR-4 |
Kingdom | Bacteria |
Replicon accession | NC_008321 |
Strand | + |
Start bp | 472477 |
End bp | 473016 |
Gene Length | 540 bp |
Protein Length | 179 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 638116984 |
Product | N-acetyl-anhydromuranmyl-L-alanine amidase |
Protein accession | YP_732562 |
Protein GI | 113968769 |
COG category | [V] Defense mechanisms |
COG ID | [COG3023] Negative regulator of beta-lactamase expression |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 35 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGCTTTG ATGCCGGATG GTTTTCCTCG GCTCGACGCT GTGAGTCATC GCATTTTAAC CGTCGCCCAT TTGGGGAAAT TAGCCTGTTG GTGATCCACA ATATCAGCCT GCCAGCGGGA TGCTTTGGAC TTCCCTATAT TGATCAATTA TTTCAAGGGT GTTTAGATAC TGAGGCCGAT GATCGTTTCG CCGATTTAGC GGGGCTGCAA GTGTCAGCAC ATTTTTTAAT TCGACGCGAT GGTGAATGTG TGCAGTATGT CAGTTGCGAA GATAGAGCCT GGCACGCAGG TGTATCTCGT TATGGCGAAA GGGAAAATTG TAATGACTTC TCTATCGGTA TCGAGCTTGA AGGCACAGAT ACTGAGCCCT ATACTGCGGC CCAATATCAG CAGCTTACAG AGTTGACTCT AGCCTTATTG GCGCAGTATC CCGCATTAAC AGCGCAGCGG ATTGTGGGGC ATTGTGACAT TGCACCGATG CGCAAGACGG ATCCAGGACC AAGCTTCGAC TGGGAAAGGT ATTTAACCGC GCTAGGCTAG
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Protein sequence | MRFDAGWFSS ARRCESSHFN RRPFGEISLL VIHNISLPAG CFGLPYIDQL FQGCLDTEAD DRFADLAGLQ VSAHFLIRRD GECVQYVSCE DRAWHAGVSR YGERENCNDF SIGIELEGTD TEPYTAAQYQ QLTELTLALL AQYPALTAQR IVGHCDIAPM RKTDPGPSFD WERYLTALG
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