Gene Shewmr4_0425 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr4_0425 
Symbol 
ID4251899 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-4 
KingdomBacteria 
Replicon accessionNC_008321 
Strand
Start bp472477 
End bp473016 
Gene Length540 bp 
Protein Length179 aa 
Translation table11 
GC content50% 
IMG OID638116984 
ProductN-acetyl-anhydromuranmyl-L-alanine amidase 
Protein accessionYP_732562 
Protein GI113968769 
COG category[V] Defense mechanisms 
COG ID[COG3023] Negative regulator of beta-lactamase expression 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones35 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGCTTTG ATGCCGGATG GTTTTCCTCG GCTCGACGCT GTGAGTCATC GCATTTTAAC 
CGTCGCCCAT TTGGGGAAAT TAGCCTGTTG GTGATCCACA ATATCAGCCT GCCAGCGGGA
TGCTTTGGAC TTCCCTATAT TGATCAATTA TTTCAAGGGT GTTTAGATAC TGAGGCCGAT
GATCGTTTCG CCGATTTAGC GGGGCTGCAA GTGTCAGCAC ATTTTTTAAT TCGACGCGAT
GGTGAATGTG TGCAGTATGT CAGTTGCGAA GATAGAGCCT GGCACGCAGG TGTATCTCGT
TATGGCGAAA GGGAAAATTG TAATGACTTC TCTATCGGTA TCGAGCTTGA AGGCACAGAT
ACTGAGCCCT ATACTGCGGC CCAATATCAG CAGCTTACAG AGTTGACTCT AGCCTTATTG
GCGCAGTATC CCGCATTAAC AGCGCAGCGG ATTGTGGGGC ATTGTGACAT TGCACCGATG
CGCAAGACGG ATCCAGGACC AAGCTTCGAC TGGGAAAGGT ATTTAACCGC GCTAGGCTAG
 
Protein sequence
MRFDAGWFSS ARRCESSHFN RRPFGEISLL VIHNISLPAG CFGLPYIDQL FQGCLDTEAD 
DRFADLAGLQ VSAHFLIRRD GECVQYVSCE DRAWHAGVSR YGERENCNDF SIGIELEGTD
TEPYTAAQYQ QLTELTLALL AQYPALTAQR IVGHCDIAPM RKTDPGPSFD WERYLTALG