| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr4_0325 |
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| Symbol | |
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| ID | 4251484 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008321 |
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| Strand | + |
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| Start bp | 348672 |
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| End bp | 349832 |
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| Gene Length | 1161 bp |
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| Protein Length | 386 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 638116880 |
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| Product | benzoate transporter |
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| Protein accession | YP_732462 |
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| Protein GI | 113968669 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG3135] Uncharacterized protein involved in benzoate metabolism |
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| TIGRFAM ID | [TIGR00843] benzoate transporter |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.072313 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 45 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTGGCGCG AGGCTTTGGG ACTATCAAAA ATATCGGCGG GCTTTATTGC TGTGCTGGTG
GGCTACAGCA GTTCGGCGGT GATTATCCTG CAGGCGGCGG ATGCCGTGGG CGCGACAGCG
GCACAGATGA GTTCATGGCT GTGGGCCTTA GGTGTCGGCA TGGGGATCAC CAGTATTGGC
CTGTCTCTCT ACTATAAAAA TCCGGTGCTT ACGGCATGGT CTACCCCCGG GGCGGCGCTG
ATGGTCACCA GCCTTGCGGG ATTAAGTATC AACGAAGCCG TTGGTGCCTT CCTGATTAGC
TCATTGTTGA TCACCCTCTG CGGCTTGGCG GGTTGGATGG ATAAGCTTAT TCGTATCATG
CCGCAGTCAG TCGCTTCGGC CATGTTAGCG GGGATTTTAC TGCAGTTTGG TTTAGGACTG
TTTCAAGCCA TGCAGACTCA ACTGAGCTTA ATCCTATTGA TGTTATTGGT GTTTGTTGTG
CTTAAGCCCT TTGTGCCGCG TTACATCATC TTGTTGACCT TGCTGGTAGG TATTGGCATG
AGTTTTCAAT TAGATTTGCT CAAGCTAGAT GCCTTTCAGT TGCAACTGGC TATGCCAGTG
TGGACCATGC CTGAGTTTTC GTTGGCGAGT GTGATTGGCG TGGCACTGCC CTTATTTGTG
GTGACTATGG CCTCGCAAAA TATGCCGGGC GTCGCCGCGC TGCACGGTAA TGGCTACAGG
CCGCCCATTT CGCCTTTGAT CACAAGTACC GGATTAGTTG GGGTAATTCT GGCGCCATTT
GGCGGTTTTG CTTTTAACTT ATCCGCCATT ACAGCGGCGA TTTGTATGGG TAAAGAAGCT
GACCCAAATC CTGCGACCCG TTACTGGGCG GCAGTGTGGG GCGGCGTGTT TTACTTTATC
ACTGGGTTAC TCGGCGCTAC TGTGGTTGGC CTGTTTTCCG CTTTCCCGAA GGAATTAGTT
CTGGCCATCG CCGGATTAGC ACTACTCGGT ACTATCGCCA ATAGCCTTAC CGCTGCATTA
GTTAAACCCG AAGATCGTGA AGTGGCGGTG ATCACCTTCT TGATCACCGC ATCAGGTTTT
AGTGTGCTGG GCATCGGCAG TGCATTTTGG GGGCTGTTGG CTGGATTTAT TATCCATGCT
TGGCAAACCA AAACACGCTA G
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| Protein sequence | MWREALGLSK ISAGFIAVLV GYSSSAVIIL QAADAVGATA AQMSSWLWAL GVGMGITSIG
LSLYYKNPVL TAWSTPGAAL MVTSLAGLSI NEAVGAFLIS SLLITLCGLA GWMDKLIRIM
PQSVASAMLA GILLQFGLGL FQAMQTQLSL ILLMLLVFVV LKPFVPRYII LLTLLVGIGM
SFQLDLLKLD AFQLQLAMPV WTMPEFSLAS VIGVALPLFV VTMASQNMPG VAALHGNGYR
PPISPLITST GLVGVILAPF GGFAFNLSAI TAAICMGKEA DPNPATRYWA AVWGGVFYFI
TGLLGATVVG LFSAFPKELV LAIAGLALLG TIANSLTAAL VKPEDREVAV ITFLITASGF
SVLGIGSAFW GLLAGFIIHA WQTKTR
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