Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewmr4_0282 |
Symbol | |
ID | 4251178 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. MR-4 |
Kingdom | Bacteria |
Replicon accession | NC_008321 |
Strand | + |
Start bp | 301776 |
End bp | 303011 |
Gene Length | 1236 bp |
Protein Length | 411 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 638116837 |
Product | periplasmic sensor signal transduction histidine kinase |
Protein accession | YP_732419 |
Protein GI | 113968626 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG0642] Signal transduction histidine kinase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 2 |
Fosmid unclonability p-value | 0.0000000209269 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | TTGCTGTTTG CCCTTTATCG GCAACTGATT ATCGAACAGC AGTACCAAGT GACTCAGTAT CTCGAGTCAG AAACCCAACG TTATCAGCAG CTTGCTCTTA CTGTCGACCG TCGTAGTTTT GCGGCGCAAA TCCGTGCCGC CGATCCGCAG ACGGCGCTCA TCGCTTGGCG TAACAGTTAT GACATGGTTG GTGCCTTAAG CTTTATGCCC GAAGGCATGC CCATGCTGCC GCAAACTCGG GATTTCCCGA TTTTAACTGG CGGCCCTGAT AAGCTGCATA TCCTTACCGG CGGCCTAGTG ATGACCCGCT ATGGCCCTGT GCTCATTGCC ACCCGTACCG ATAACTTAGC CACCTTGATC GATAAGTTTA TCAGTGCGGC GGCCACGGCC GTGATGCTGA CTATTGTACT CACTTTGGCA CTGGGCTATT TGTTTTCTAA GGCGATTTTG CGCCGCTTAG TGCAGTACAA CCGCTTGAGT GAGCAAATTG AGCGGGGGCA TTACGATACG CGTCTGCCGC TCAGTTGGCG TCAGGACGAG TTCGATATGC TGGCGCTGCA GTTTAATAAC GTGCTGGATA TTCTTGAGAA TAACCTGATG GCGGTGCGCG GGGTGACTGA CAATATTGCC CACGATTTGC GTACGCCCCT ATCCCATATT CGCATCGGTC TTGAGGAGTT AGCGGCCAAA TCCCCCGATG AAATCAGCGA AGGTTGCGCT ATTTTGACCG AAGAGCTCGA CCACTGCCTT GCGACCTTCG ATGCCATGCT CTCGCTGACA CGCATCGAGG AAGGGCAGCA AACCTTAGAT CTGCAGGAGC TGAGCTTGGC GCAGCTATGT ACCGATCTGC TGGATATGGC CGACGCGGTC GCCGAATCGA ATGAGCAAAC TTTGAGCCTG TCGCTTCTAT CTGATCATAA AGTTTATGGC GATAAATATT TGTTGTTCCA GGCTTTATAT AATCTGGTCG ACAATGCGAT GAAGTACTCA GGTCAAGGCG CTCGCATCGA TATTATTCAA TCCGGCGCCC AAATTAAGAT TTGCGATAAC GGCCCAGGGA TCCCCGATGA CAGCAAAGAA AGGGTGTTTG AGCGTCTAGT GCGTCTCGAC CCAAGCCGAC ATTTGCAGGG CACGGGTTTA GGATTATCTA TGGTCAAAGC GATCATGTCG CGGCACAATG CGCAAATTAC TCTTTCGGAT AATCATCCAG GCCTAGTGGT GACCATTCAG TTTTAG
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Protein sequence | MLFALYRQLI IEQQYQVTQY LESETQRYQQ LALTVDRRSF AAQIRAADPQ TALIAWRNSY DMVGALSFMP EGMPMLPQTR DFPILTGGPD KLHILTGGLV MTRYGPVLIA TRTDNLATLI DKFISAAATA VMLTIVLTLA LGYLFSKAIL RRLVQYNRLS EQIERGHYDT RLPLSWRQDE FDMLALQFNN VLDILENNLM AVRGVTDNIA HDLRTPLSHI RIGLEELAAK SPDEISEGCA ILTEELDHCL ATFDAMLSLT RIEEGQQTLD LQELSLAQLC TDLLDMADAV AESNEQTLSL SLLSDHKVYG DKYLLFQALY NLVDNAMKYS GQGARIDIIQ SGAQIKICDN GPGIPDDSKE RVFERLVRLD PSRHLQGTGL GLSMVKAIMS RHNAQITLSD NHPGLVVTIQ F
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