Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewmr4_0238 |
Symbol | |
ID | 4251012 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. MR-4 |
Kingdom | Bacteria |
Replicon accession | NC_008321 |
Strand | + |
Start bp | 258855 |
End bp | 259367 |
Gene Length | 513 bp |
Protein Length | 170 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 638116794 |
Product | hypothetical protein |
Protein accession | YP_732376 |
Protein GI | 113968583 |
COG category | [S] Function unknown |
COG ID | [COG3812] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 3 |
Fosmid unclonability p-value | 0.0000000556975 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGCTTTATG ATTTAACGGC TGTTCAATTT AGCAAGATGC TGAAAAACTT GAGTCTTATT CTGGAAAAGG GTGAGATTTT TGCCAACTTG AAGAAGGTGG ATATGGCGGT ATTATTAAAT TCCCGCTTAG CACCCGATCA ATTTAATCTG ATCCGTCAGA TCCAGATTGC CTGTGATACC GCCAAGATTG GAGTCGCGCG TCTGACGGGT AATTTAGATA CAGTGCCTAA GCATGATGAT ACTGAAACGA CTCTGCCTGA GCTGCAGGCG CGTATTGCTT CTGTTATCGA GTACTTGGCT CAATTTACCG AAGCAGATTT TACCGATGCG GCGACAATTC ACGTTTCTCA ACCGCGTTGG GAAGGTAAGT ATTTAACGGG ATACGAGTTT GCGATTGAGC ATGCAATCCC GAACTTATAT TTCCATGTGA CGACGGCCTA TGCGATTCTG CGCCATAACG GTGTGGATGT GGGTAAGAAA GATTATCTTG GCCCTATGCC TTACAAGTCG TAA
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Protein sequence | MLYDLTAVQF SKMLKNLSLI LEKGEIFANL KKVDMAVLLN SRLAPDQFNL IRQIQIACDT AKIGVARLTG NLDTVPKHDD TETTLPELQA RIASVIEYLA QFTEADFTDA ATIHVSQPRW EGKYLTGYEF AIEHAIPNLY FHVTTAYAIL RHNGVDVGKK DYLGPMPYKS
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