Gene Shewmr4_0238 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr4_0238 
Symbol 
ID4251012 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-4 
KingdomBacteria 
Replicon accessionNC_008321 
Strand
Start bp258855 
End bp259367 
Gene Length513 bp 
Protein Length170 aa 
Translation table11 
GC content45% 
IMG OID638116794 
Producthypothetical protein 
Protein accessionYP_732376 
Protein GI113968583 
COG category[S] Function unknown 
COG ID[COG3812] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0000000556975 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGCTTTATG ATTTAACGGC TGTTCAATTT AGCAAGATGC TGAAAAACTT GAGTCTTATT 
CTGGAAAAGG GTGAGATTTT TGCCAACTTG AAGAAGGTGG ATATGGCGGT ATTATTAAAT
TCCCGCTTAG CACCCGATCA ATTTAATCTG ATCCGTCAGA TCCAGATTGC CTGTGATACC
GCCAAGATTG GAGTCGCGCG TCTGACGGGT AATTTAGATA CAGTGCCTAA GCATGATGAT
ACTGAAACGA CTCTGCCTGA GCTGCAGGCG CGTATTGCTT CTGTTATCGA GTACTTGGCT
CAATTTACCG AAGCAGATTT TACCGATGCG GCGACAATTC ACGTTTCTCA ACCGCGTTGG
GAAGGTAAGT ATTTAACGGG ATACGAGTTT GCGATTGAGC ATGCAATCCC GAACTTATAT
TTCCATGTGA CGACGGCCTA TGCGATTCTG CGCCATAACG GTGTGGATGT GGGTAAGAAA
GATTATCTTG GCCCTATGCC TTACAAGTCG TAA
 
Protein sequence
MLYDLTAVQF SKMLKNLSLI LEKGEIFANL KKVDMAVLLN SRLAPDQFNL IRQIQIACDT 
AKIGVARLTG NLDTVPKHDD TETTLPELQA RIASVIEYLA QFTEADFTDA ATIHVSQPRW
EGKYLTGYEF AIEHAIPNLY FHVTTAYAIL RHNGVDVGKK DYLGPMPYKS