| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr4_0235 |
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| Symbol | |
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| ID | 4251009 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008321 |
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| Strand | + |
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| Start bp | 251327 |
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| End bp | 251881 |
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| Gene Length | 555 bp |
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| Protein Length | 184 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 638116787 |
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| Product | periplasmic protein thiol--disulphide oxidoreductase DsbE |
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| Protein accession | YP_732373 |
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| Protein GI | 113968580 |
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| COG category | [C] Energy production and conversion
[O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0526] Thiol-disulfide isomerase and thioredoxins |
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| TIGRFAM ID | [TIGR00385] periplasmic protein thiol:disulfide oxidoreductases, DsbE subfamily |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.0000141512 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 1 |
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| Fosmid unclonability p-value | 0.000000000685218 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAAGAAGT TGGTTCTGTT TATCCCATTA GTCATCTTTC TTGGCATGGG GGTATTTTTA
TACAAAGGAT TGTTTTTAAA TCCACAGAAA CTGGATTCAG CTCTGGAAGG AAAGCCGATC
CCGGCTTTCC AACTGGAACG TCTCGAAACA CCAAACGAGA TGATTACCAA TGAGCAACTG
AAAGGTAAAG TGTCACTACT TAACGTATGG GCCACTTGGT GCCCATCTTG TAAGTATGAG
CATCCTTTCT TAGTCATGCT GAAACGCCAA AATATTCTGC CTATCTACGG GATTAACTAC
CGCGATGAGC GTATTCCCGC ACTGGAAGAA TTGAAACGTC AAGGCGATCC ATACCATATC
AACATCTTTG ATAAGGATGG ACGCTTAGGG TTAGATTTGG GTGTGTATGG CGCGCCAGAA
AGCTTTATTG TCGATCATAA AGGTATTATT CGCTTCCGTT ACGCGGGTCC AATCGACCAA
CGCGTGTGGA GCGAAACTCT GTATCCTATG ATCCAACAAT TACAAGCTGA AGCGGCGAAG
GATGGTGCAG CGTGA
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| Protein sequence | MKKLVLFIPL VIFLGMGVFL YKGLFLNPQK LDSALEGKPI PAFQLERLET PNEMITNEQL
KGKVSLLNVW ATWCPSCKYE HPFLVMLKRQ NILPIYGINY RDERIPALEE LKRQGDPYHI
NIFDKDGRLG LDLGVYGAPE SFIVDHKGII RFRYAGPIDQ RVWSETLYPM IQQLQAEAAK
DGAA
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