| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr4_0219 |
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| Symbol | secY |
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| ID | 4250677 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008321 |
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| Strand | + |
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| Start bp | 238558 |
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| End bp | 239898 |
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| Gene Length | 1341 bp |
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| Protein Length | 446 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 638116771 |
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| Product | preprotein translocase subunit SecY |
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| Protein accession | YP_732357 |
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| Protein GI | 113968564 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0201] Preprotein translocase subunit SecY |
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| TIGRFAM ID | [TIGR00967] preprotein translocase, SecY subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 0.0000000744124 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | unclonable |
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Fosmid Coverage information |
| Num covering fosmid clones | 0 |
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| Fosmid unclonability p-value | 0.0000000000304117 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | unclonable |
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Sequence |
| Gene sequence | ATGGCAAAAC CAGGACTTGA TTTAAAAAGC GCGAAAGGTG GACTTTCTGA ATTGAAAGCT
CGCCTCCTGT TCGTGATTGG TGCGATTATC GTCTTTAGAG CCGGTTCGTT TGTGCCAATT
CCTGGTATTG ACGCAGCTGT ATTAGCAGAG CTGTTTGCTC AGCAAAAAGG TACCATCCTT
GGCATGTTTA ACATGTTCTC GGGTGGTGCT CTTTCCCGTG CTTCTATCTT CGCATTAGGT
ATCATGCCGT ACATTTCGGC ATCGATTATC ATGCAGTTAT TGACTGTTGT GCATCCTGCA
CTCGCTGAAT TGAAAAAAGA AGGCGAGTCT GGACGTAAAA AAATCAGTCA GTACACACGA
TGGGGTACGT TGGTGCTGGG TACATTCCAG TCGATCGGTA TTGCAACAGG GTTACCAAAC
TTAGTCCCAG GCCTTGTGGT CAACATTGGA TTCGGTTTCT ACTTTGTAGC GGTTGTGAGC
TTAGTAACAG GAACTATGTT CCTGATGTGG CTAGGTGAAC AAATTACCGA ACGAGGTATA
GGTAACGGTA TCTCGATTTT AATTTTCGCA GGTATTGTTG CTGGATTACC TTCCGCTATC
GGCCAAACGG CTGAGCAGGC GCGTCAAGGT GACCTGAATG TGTTAGTATT GTTGTTGCTC
GCGGTAATTA TTTTTGCTGT GACTTATTTC GTGGTGTTTG TAGAACGTGG TCAACGTCGT
ATCGTTGTTA ACTACGCTAA GCGCCAGCAA GGCCGTAAGG TGTTCGCTGC GCAATCTACT
CACTTGCCGC TGAAAATAAA CATGGCGGGT GTAATTCCCC CAATTTTTGC GTCAAGCATC
ATTTTGTTCC CAGGTACACT GGCTCAGTGG TTTGGTCAAA ATGAGTCTAT GTCATGGTTA
AGTGATTTTT CACTGGCTGT GTCACCAGGA CAACCGCTTT ACTCATTATT GTATGCAGCA
GCGATTATCT TCTTCTGTTT CTTCTATACT GCGTTGGTAT TTAACCCACG TGAAACAGCA
GATAACCTGA AGAAGAGTGG TGCATTCATC CCTGGGATCC GTCCTGGAGA ACAGACTTCG
CGTTACATTG ATAAAGTAAT GACTCGCCTA ACATTAGCTG GCGCGTTATA CATTACCTTT
ATCTGTTTAA TTCCGGAGTT CATGTTAATT GCGTGGAAAG TACAGTTCTA TTTTGGCGGT
ACTTCACTAC TAATTATGGT AGTCGTAATC ATGGACTTCA TGGCTCAGGT TCAGACCCAT
ATGATGTCAC ATCAATATGA GTCTGTGATG AAGAAAGCTA ACCTAGTAAA CAAAGCGAAT
TTAGATCGCT TTGGTCGCTA A
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| Protein sequence | MAKPGLDLKS AKGGLSELKA RLLFVIGAII VFRAGSFVPI PGIDAAVLAE LFAQQKGTIL
GMFNMFSGGA LSRASIFALG IMPYISASII MQLLTVVHPA LAELKKEGES GRKKISQYTR
WGTLVLGTFQ SIGIATGLPN LVPGLVVNIG FGFYFVAVVS LVTGTMFLMW LGEQITERGI
GNGISILIFA GIVAGLPSAI GQTAEQARQG DLNVLVLLLL AVIIFAVTYF VVFVERGQRR
IVVNYAKRQQ GRKVFAAQST HLPLKINMAG VIPPIFASSI ILFPGTLAQW FGQNESMSWL
SDFSLAVSPG QPLYSLLYAA AIIFFCFFYT ALVFNPRETA DNLKKSGAFI PGIRPGEQTS
RYIDKVMTRL TLAGALYITF ICLIPEFMLI AWKVQFYFGG TSLLIMVVVI MDFMAQVQTH
MMSHQYESVM KKANLVNKAN LDRFGR
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