| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr4_0217 |
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| Symbol | rpmD |
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| ID | 4250675 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008321 |
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| Strand | + |
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| Start bp | 237930 |
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| End bp | 238112 |
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| Gene Length | 183 bp |
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| Protein Length | 60 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 638116769 |
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| Product | 50S ribosomal protein L30 |
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| Protein accession | YP_732355 |
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| Protein GI | 113968562 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG1841] Ribosomal protein L30/L7E |
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| TIGRFAM ID | [TIGR01308] ribosomal protein L30, bacterial/organelle |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.000105847 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | 0 |
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| Fosmid unclonability p-value | 0.0000000000126926 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | unclonable |
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| |
Sequence |
| Gene sequence | ATGGCTACTA AAACTGTAAA AGTTACTCAG ACTAAAAGTG CTATCGGTCG TTTACCAAAG
CACCGCGCGA CCTTAACAGG TCTTGGTCTG CGTCGCATTG GTCACACTGT TGAATTAGAA
GATACTCCTT CTGTTCGCGG TATGATCAAC AAGGTCTACT ACATGGTTAA GGTGGAGGAT
TAA
|
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| Protein sequence | MATKTVKVTQ TKSAIGRLPK HRATLTGLGL RRIGHTVELE DTPSVRGMIN KVYYMVKVED
|
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