Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewmr4_0179 |
Symbol | |
ID | 4250724 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. MR-4 |
Kingdom | Bacteria |
Replicon accession | NC_008321 |
Strand | + |
Start bp | 200018 |
End bp | 200836 |
Gene Length | 819 bp |
Protein Length | 272 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 638116722 |
Product | glutamate racemase |
Protein accession | YP_732317 |
Protein GI | 113968524 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0796] Glutamate racemase |
TIGRFAM ID | [TIGR00067] glutamate racemase |
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Plasmid Coverage information |
Num covering plasmid clones | 0 |
Plasmid unclonability p-value | 0.00000000377093 |
Plasmid hitchhiking | No |
Plasmid clonability | unclonable |
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Fosmid Coverage information |
Num covering fosmid clones | 23 |
Fosmid unclonability p-value | 0.781333 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGTCGCAAC CAATATTAGT ATTCGATTCT GGCATCGGCG GTCTATCCGT ATTGGCCGAA ATTCGCAAAC TGCTCCCACA TCACGATTAC TGCTATTTAT TCGATAATGC CAGATTGCCC TATGGCGAAT TGGAAGAGCA GGAACTTGTC TCGGGTTGTG TTGCGCTCAT CGACCAAGTT GTCGAGCGTA CCCACGCTGC CATTGTTGTC GTAGCTTGCA ATACCGCGAG TACTGTTGTG CTGCCCGCGC TGCGTGCCAC TCTATCTATT CCTGTGGTGG GCGTTGTCCC CGCCATTAAA CCCGCGGCGC AGTTATCTAA AAGTAAGCGT ATTGGTTTGC TGGCCACTCC TGGTACGGTC AAGCGCCACT ACACCTACGA ACTCATCAGC CAATTTGCCG ATGATTGCCA CGTTGAGCTG TTCGGATCTT CCGAATTAGT GCTAATGGCC GAACAGAAGA TTGCCACAGG CCAATTAGAT ATGGCGCGGT TAACACAGGT GCTATCACCC ATCGTCACAG CGGACTTAGA TGTATTGGTG CTTGGATGTA CTCACTTCCC CATGCTGCGT GATGAACTGC AACAGGTATT AGGTAAAGGT GTCACCTTGC TCGATTCTGG AGAGGCTATA GCCAAGCGAG TCAAAACCTT GTTGGCTGAG ACTAAGAGTG AGCAGCAAGT TCAAGAAGAC GCAAATCGAG ATTCGGTAAT GCAGGCGTTT TATACTAAAG CGAAAATCAG TGAGGGATTG GTGAGTATGT TAGTCGATTG TGGCTTTTCG ACCCTAGAGC GAATCACCAC AATCAACTCG AACAGATAA
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Protein sequence | MSQPILVFDS GIGGLSVLAE IRKLLPHHDY CYLFDNARLP YGELEEQELV SGCVALIDQV VERTHAAIVV VACNTASTVV LPALRATLSI PVVGVVPAIK PAAQLSKSKR IGLLATPGTV KRHYTYELIS QFADDCHVEL FGSSELVLMA EQKIATGQLD MARLTQVLSP IVTADLDVLV LGCTHFPMLR DELQQVLGKG VTLLDSGEAI AKRVKTLLAE TKSEQQVQED ANRDSVMQAF YTKAKISEGL VSMLVDCGFS TLERITTINS NR
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