Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewmr4_0163 |
Symbol | |
ID | 4250691 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. MR-4 |
Kingdom | Bacteria |
Replicon accession | NC_008321 |
Strand | + |
Start bp | 184760 |
End bp | 185758 |
Gene Length | 999 bp |
Protein Length | 332 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 638116706 |
Product | general secretion pathway protein K |
Protein accession | YP_732301 |
Protein GI | 113968508 |
COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG3156] Type II secretory pathway, component PulK |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 24 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATAAAGC GAAGTCCGAC TAAACAACGT GGCGTCGCGC TGATTGTGGT GTTGCTGATC GTGGCCATGG TGGTGATTAT CGCCACCAAT ATTACCAGCC GTAATCAGTT GTCGATGCGC CGCACCTTAA ACTTAGCCCA GTACGATCAG GCCTATTGGT ACGCGATTTC CGCCGAAGAG CTGGCTAAGA AAATCCTTAA GCAGGACTTA GACGATTCGG AAGGCCGGGT ACACAAGCAA CAATATTGGG CCATGAGCGA CGTGGTATTT CCGGCGGAAT ATGGTGAGAT TGCAGGCAAG ATCACCGATA TGCGTTCGTG TTTTAACTTA AATGCTTTGT CCGTCACCAC AAAAGATGTG GAAAACGGTC AACCTAAATT GCCGTTAGCG GCAAAGCAAT ACAAAGCGTT ATTAGTGAGT TTAGGGATGG ATGATTTTAC CGCGGATCAT CTGACCCAAA CCTTAAAGGA TTATATCGAC GAGGACACGG TCGCTAGCCC ATATGGCGCC GAAGATGCCG AGTACGAGGC GCGAAATGTG CCTTATCGCG CCGCAAATAC CCTGATGAAT CACAGGAGTG AGTTGCGGGC GGTGATAGGT TACACCCAAG ATATTTATCT GAAATTATTG CCTTATATTT GCGTCATTCC AGGGAATGAC AGGCAACTGT TAAACGTGAA CACCATAGAG GTTGAGCAAG CGGCGCTGCT GGCGGCCATG CTGGATAATC AGATTTCGGT TGGCGAGGCC GAAAGCATTA TCAACCAACG TCCCGGTGAT GGTTTTGCCA AGATCGATGA TTTTTATGAA TCCTCCTCAA TGGGGTCGAT TAAGTGGGAA GATGCGATGA AGTCCAGTTT TGTGGTGGAC AGTCAGTACT TCCTCCTCGC CTCGGGCGCT AAGGTCGACA ACGCCATTTT TAGAATGGAG AGCGTGCTCA AAAAGAGCAG CGGTAACAAA ATGGATGTGC TCACCCGTCA GTTTGGTGGA CAAAAATAA
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Protein sequence | MIKRSPTKQR GVALIVVLLI VAMVVIIATN ITSRNQLSMR RTLNLAQYDQ AYWYAISAEE LAKKILKQDL DDSEGRVHKQ QYWAMSDVVF PAEYGEIAGK ITDMRSCFNL NALSVTTKDV ENGQPKLPLA AKQYKALLVS LGMDDFTADH LTQTLKDYID EDTVASPYGA EDAEYEARNV PYRAANTLMN HRSELRAVIG YTQDIYLKLL PYICVIPGND RQLLNVNTIE VEQAALLAAM LDNQISVGEA ESIINQRPGD GFAKIDDFYE SSSMGSIKWE DAMKSSFVVD SQYFLLASGA KVDNAIFRME SVLKKSSGNK MDVLTRQFGG QK
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