Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewmr4_0151 |
Symbol | |
ID | 4250873 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. MR-4 |
Kingdom | Bacteria |
Replicon accession | NC_008321 |
Strand | - |
Start bp | 171643 |
End bp | 173202 |
Gene Length | 1560 bp |
Protein Length | 519 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 638116694 |
Product | AbgT putative transporter |
Protein accession | YP_732289 |
Protein GI | 113968496 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG2978] Putative p-aminobenzoyl-glutamate transporter |
TIGRFAM ID | [TIGR00819] p-Aminobenzoyl-glutamate transporter family |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 26 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGAAAACC ATAAACCTGT CACTGGATTC CAGCGATTTC TCAATGGCGT CGAAATCGTC GGCAATAAAC TGCCCGATCC GGCGGTGTTA TTTGCGATGT TTCTGGGCCT AGTCTGGCTG ATCTCTTGGG GATTATCGGG TGTCAGTTTT GATGAAATCG ACCCTCGTAC TGGCAACCCC ATTCAAGTCG TGAATATGCT CGAAGGCGGC GCACTGACGG CATTTACCTC GAACATAGTC TCCACTTTTG TGACTTTTCC ACCGCTCGGT GTTGTACTAG TTGCTATGCT GGGGCTTGGC GTGGCTGAGC ATACTGGCTT TATTAATGCT GGCCTGCGCT CGATTTTATC TGTTACCCCC AAGATGTTAC TCACCCCGGT ATTGATCGCC GTGGGTATCC TGAGCCATGT CGCGGTTGAT GCGGGTTATG TACTGGTTAT CCCGCTCGGC GCGGTGATCT TCTATGCCGC GGGTCGTCAT CCCCTAGCCG GTATTGCCGC CGCTTTTGCT GGCGTATCCG GCGGTTTTTC TGCAACAGTG GGTGTGCCAT CGAGCCTTGA CCCTATGTTA GCGGGCTTAA CTCAGGCCGC GGCAAGATTA TCGGCCGACC CCGCGGCCGC CACATTAACG ATTAACCCAC TGAATAATAT CTTTTTTACG TCTGCTTCAG CCGTGTTAAT TATCTTAGTT GGCTGGTTCT TAACGGATAA AGTGATTGAG CCGCGCCTAA AAAGTACCGC GGTGAATGGC GATCCCAGCA CGTTGCCAAC GCTTGATGAG CTGGCGCCCC ATGAGCGCCG TGGTCTCAAA TTCGCCATGG GCGCCATGTT GTTATGTGCC TTAGGGCTAG TGTTTACCGC CTATGGTGAC AACTCTGCCT GGCGTGGTAC CGATGGCGCG CTAACCAGTG CCTCGGCTCC CTTAATGCGC TCCATTGTGG CGATTATTTT TGTGTTCTTC CTCGTGCCAG GCATAGTCTA TGGCTATGTT GCGGGCACGG CAAACAACCA CAGAGCCATT ATTCAAGGCA TGAGTAAGTC CATGAGCGGC ATGGGTTATT ACATCGTCAT GGCCTTCTTC TGCGCCCAGT TTATTTATGC CTTTGGTCAA TCCAATTTAG GCGCATTAAT GGCGATTAAA GGCGCGTTGG CGTTGAAAGA ATTGGCGCTT CCAATGGGCG TAACATTAGT GGGGATTGTG TTTCTCACCG CGTTCGTCAA TCTATTAGTC GGCTCGGCGT CGGCCAAATG GGCCTTGATT GGAGCCATCA TGGTGCCCAT GTTAATGGAA CTGGGCGTAT CGCCCGATTT AACTCAAGCC GCTTACCGCG TGGGCGACTC GTCGACCAAT ATCATTACCC CGCTGATGCC TTACTTTCCG TTAATTGTGG TGTTTTGCCA AAAATACGTT AAGGAATCCG GCATAGGCAC CTTAGTGGCG CTGATGCTGC CGTTTTCAAT CAGTTTTCTG CTGCTTTGGA GCGGTTTCTT ATTGGCATAT TGGGCATTAG GTCTGCCATT AGGAATTGGC AGTTCACTCT CCTTCCCGGC ACTATCTTAG
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Protein sequence | MENHKPVTGF QRFLNGVEIV GNKLPDPAVL FAMFLGLVWL ISWGLSGVSF DEIDPRTGNP IQVVNMLEGG ALTAFTSNIV STFVTFPPLG VVLVAMLGLG VAEHTGFINA GLRSILSVTP KMLLTPVLIA VGILSHVAVD AGYVLVIPLG AVIFYAAGRH PLAGIAAAFA GVSGGFSATV GVPSSLDPML AGLTQAAARL SADPAAATLT INPLNNIFFT SASAVLIILV GWFLTDKVIE PRLKSTAVNG DPSTLPTLDE LAPHERRGLK FAMGAMLLCA LGLVFTAYGD NSAWRGTDGA LTSASAPLMR SIVAIIFVFF LVPGIVYGYV AGTANNHRAI IQGMSKSMSG MGYYIVMAFF CAQFIYAFGQ SNLGALMAIK GALALKELAL PMGVTLVGIV FLTAFVNLLV GSASAKWALI GAIMVPMLME LGVSPDLTQA AYRVGDSSTN IITPLMPYFP LIVVFCQKYV KESGIGTLVA LMLPFSISFL LLWSGFLLAY WALGLPLGIG SSLSFPALS
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