| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr4_0149 |
|---|
| Symbol | |
|---|
| ID | 4250871 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella sp. MR-4 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008321 |
|---|
| Strand | - |
|---|
| Start bp | 167914 |
|---|
| End bp | 169653 |
|---|
| Gene Length | 1740 bp |
|---|
| Protein Length | 579 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 48% |
|---|
| IMG OID | 638116692 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_732287 |
|---|
| Protein GI | 113968494 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 26 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTTTAAAC CTAAACTACT CTCTTTGCTG ATCGCCACCA GTTTGCTGAC GGCATGTTCT
GGCTCAGACG ATAAAGATGA CACCACCACG ACGCCAGAGC CGACGCCTCC AACTGAATAC
GCACATAAGG TCACAGGTCA GGTCACTTAT ATCGGCGCTA TCGCCGGGGC AAACGTGTGC
GTCGATCTCA ACCAAGACTT AAGCTGCTCA GAGGGTGAAC CGAGCACCAC TACGGGCACT
GACGGTAAGT ATCAAATCGA TTGGAAAAGC GAGACCGAAA AACCTAACTA TTACCTGTTG
GCCAATTGGA TTGATACCGC ACCGTCATCT GCACGCTCAG CATTGGCGAT GAGCTCCGCC
GCAGATAACA CTAACGCCAC CACTGGCGGC ATGAATATCG TTGCCCTGCC CGATCATGCG
GGTCATATCA ACGCGCTGAC CAATATTGAG TTTTCACGCT ATCGCAAGAT GATTGAGGCC
GACTTAACGC CACAGCAAGT GATTGAGTTC CGTGCCAGAC TCAAATCCTT ATACGCCACT
GGATTTAAAC AAGTCGAAGC CGATTTATTT AGTCTTTCGC CCGAAATCAC CCTGCAACCC
ACATTTCTCG ACACCCTGCT GTTACACGAT TACCTGTTAA ACCTCACCAA CGAGCGCACA
GTGGAAATTT TGGCGGCTAT CGAAGTGTTA ATCGCCGCAT TTGAAGCCTT CGAGAATTTA
ATCCTAGGGT ATGGTTTTGG CACTGAGGCT TATCTGCAAA CCAATCCAGT AGCCGTCACT
GATAAGGTGG AGAGCACCTT AGTGTCCTTC GGTTATATGG AAGCGCCGGT TGATGGTAAG
GCGATGAACA GCACTGACTG GGATACAGTG TTTAGCAGCA TGCTCAATCA TACCGACGCA
TCTCATGTGC TCAATATCGC CACCGTTCGC AACAGCCACT TTGTCAGCTT AGATTATGGT
ACTGCTGACC AAACTCTTAC TGGCATATTT TCAGGTGACG CAGTGATGAT CTTCGACAAC
ACGTCTGGAG AGGAAGTCCC TACCGAATGT TGGAATGAGC CGATGAAAAA ATGGATCAAT
GCCTCGCGTA ACGACCAAGG GTATGTGCTT AAAGAACCTG TGATTGAAGG CAATCAATTA
AAAACCGTTT ATGCCGGCAC TGAAGTCCCT GTCGAAATGA ATTTCCATAA GTATCAGAAC
ACGGCCGCTG ACTGGCAGGA TTTGCTGGCA AATCTCCCGA GCGACCTTAA ACTAGCGTCA
CTCAGTTGGC CTTCGCAAAT ATATCGCATG GATATTAAAC AAACGGCCGA CGTGTTATGC
CGCGAAGAAG ATCCCATCAC CTATGAAACG GGCGTTGAAA CCGCGAGCCA GCTTTCCTCT
AGCTTAATCG TGGAGCTATT GTGGCCCTTC GCTTACCCCG AGAGTTACGT TGAGGACTCA
ACGAATAAAT TCACCATTCT CGATAGCTTC GGTCAGCCTG AAAGCCAACA TGAATGGAGC
ATTAGCACCA GTCCGAACGG CGGCAAGCTG CTAACTATCA CTGAAATTGT GGAGGATCCG
ATTGCTAGCC AGATGGTGCA ACCGAGCTAC TACCTTGTGA CCTCAAACTT GCTAACCGAA
GTTGAGCTAA ACAAGGCTTT TGATACATCA GTAAATAAAC AGTTTTATCG ATTTACCTAC
GACAGCAGCT TCAGCAACAC GCTATACAAC CATTTTAAAT CCCTAACAAC CCAACCTTAA
|
|---|
| Protein sequence | MFKPKLLSLL IATSLLTACS GSDDKDDTTT TPEPTPPTEY AHKVTGQVTY IGAIAGANVC
VDLNQDLSCS EGEPSTTTGT DGKYQIDWKS ETEKPNYYLL ANWIDTAPSS ARSALAMSSA
ADNTNATTGG MNIVALPDHA GHINALTNIE FSRYRKMIEA DLTPQQVIEF RARLKSLYAT
GFKQVEADLF SLSPEITLQP TFLDTLLLHD YLLNLTNERT VEILAAIEVL IAAFEAFENL
ILGYGFGTEA YLQTNPVAVT DKVESTLVSF GYMEAPVDGK AMNSTDWDTV FSSMLNHTDA
SHVLNIATVR NSHFVSLDYG TADQTLTGIF SGDAVMIFDN TSGEEVPTEC WNEPMKKWIN
ASRNDQGYVL KEPVIEGNQL KTVYAGTEVP VEMNFHKYQN TAADWQDLLA NLPSDLKLAS
LSWPSQIYRM DIKQTADVLC REEDPITYET GVETASQLSS SLIVELLWPF AYPESYVEDS
TNKFTILDSF GQPESQHEWS ISTSPNGGKL LTITEIVEDP IASQMVQPSY YLVTSNLLTE
VELNKAFDTS VNKQFYRFTY DSSFSNTLYN HFKSLTTQP
|
|---|
| |